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  5. CCG27398

CCG27398 (L27Ae)


Aliases : L27Ae

Description : LSU ribosomal protein L15p (L27Ae) [Ensembl]. Ribosomal proteins 50S-L15 [Interproscan].


Gene families : OG_02_0000565 (OrthoFinder) Phylogenetic Tree(s): OG0000565_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCG27398
Cluster HCAA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
AAC76326 rplO, b3301 50S ribosomal subunit protein L15 [Ensembl]. Ribosomal... 0.13 OrthoFinder
AAK99012 spr0208, rplO 50S Ribosomal protein L15 [Ensembl]. Ribosomal proteins... 0.13 OrthoFinder
AAL22284 STM3421, rplO 50S ribosomal subunit protein L15 [Ensembl]. Ribosomal... 0.13 OrthoFinder
ADK86710 rplO, MPNE_0212 ribosomal protein L15 [Ensembl]. Ribosomal proteins... 0.11 OrthoFinder
AEA92857 rplO, OG1RF_10170 50S ribosomal protein L15 [Ensembl]. Ribosomal proteins... 0.12 OrthoFinder
AGT22261 N559_0453 50S ribosomal protein L15 [Ensembl]. 0.09 OrthoFinder
AHY40874 rplO, CJ8421_08510 50S ribosomal protein L15 [Ensembl]. Ribosomal proteins... 0.08 OrthoFinder
AKI50548 rplO, L2625_02758 ribosomal protein L15 [Ensembl]. Ribosomal protein... 0.08 OrthoFinder
CBI65735 rplO, HPB8_178 large subunit ribosomal protein L15 [Ensembl]. Ribosomal... 0.1 OrthoFinder
CCL20582 rplO, BN171_70022 50S ribosomal protein L15 [Ensembl]. Ribosomal proteins... 0.12 OrthoFinder
CPD14161 rplO, ERS093114_02141 50S ribosomal protein L15 [Ensembl]. Ribosomal proteins... 0.14 OrthoFinder
CRO74310 rplO 50S ribosomal protein L15 [Ensembl]. Ribosomal proteins... 0.11 OrthoFinder
EDJ91375 rplO, CGSHi22421_04708 50S ribosomal protein L15 [Ensembl]. Ribosomal proteins... 0.14 OrthoFinder
KNA54991 VCV51_033174 ribosomal protein L15 [Ensembl]. Ribosomal proteins... 0.12 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR021131 Ribosomal_L18e/L15P 28 144
No external refs found!