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  5. CCG27406

CCG27406


Description : LSU ribosomal protein L17p [Ensembl]. Ribosomal protein L17 [Interproscan].


Gene families : OG_02_0000479 (OrthoFinder) Phylogenetic Tree(s): OG0000479_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCG27406
Cluster HCAA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
AAC76319 rplQ, b3294 50S ribosomal subunit protein L17 [Ensembl]. Ribosomal... 0.23 OrthoFinder
AAK99020 spr0216, rplQ 50S Ribosomal protein L17 [Ensembl]. Ribosomal protein... 0.2 OrthoFinder
AAL22277 STM3414, rplQ 50S ribosomal subunit protein L17 [Ensembl]. Ribosomal... 0.24 OrthoFinder
AEA92865 rplQ, OG1RF_10178 50S ribosomal protein L17 [Ensembl]. Ribosomal protein... 0.21 OrthoFinder
AGT22266 N559_0458 50S ribosomal protein L17 [Ensembl]. 0.05 OrthoFinder
AHY40769 rplQ, CJ8421_07985 50S ribosomal protein L17 [Ensembl]. Ribosomal protein... 0.19 OrthoFinder
AKI50540 rplQ, L2625_02750 ribosomal protein L17 [Ensembl]. Ribosomal protein L17... 0.17 OrthoFinder
AKP15147 rplQ, WX61_01093 50S ribosomal protein L17 [Ensembl]. Ribosomal protein... 0.05 OrthoFinder
CBI65744 rplQ, HPB8_187 large subunit ribosomal protein L17 [Ensembl]. Ribosomal... 0.17 OrthoFinder
CCL20592 rplQ, BN171_70032 50S ribosomal protein L17 [Ensembl]. Ribosomal protein... 0.2 OrthoFinder
CCP46278 rplQ, Rv3456c 50S ribosomal protein L17 RplQ [Ensembl]. Ribosomal... 0.19 OrthoFinder
CPD14418 rplQ, ERS093114_02149 50S ribosomal protein L17 [Ensembl]. Ribosomal protein... 0.27 OrthoFinder
CRO74536 rplQ 50S ribosomal protein L17 [Ensembl]. Ribosomal protein... 0.19 OrthoFinder
EDJ91382 CGSHi22421_04743 50S ribosomal protein L17 [Ensembl]. Ribosomal protein... 0.25 OrthoFinder
KNA54998 VCV51_033181 ribosomal protein L17 [Ensembl]. Ribosomal protein L17... 0.16 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003922 GMP synthase (glutamine-hydrolyzing) activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0007154 cell communication IEP Enrichment
BP GO:0007267 cell-cell signaling IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009372 quorum sensing IEP Enrichment
BP GO:0009595 detection of biotic stimulus IEP Enrichment
BP GO:0009607 response to biotic stimulus IEP Enrichment
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0023052 signaling IEP Enrichment
BP GO:0032784 regulation of DNA-templated transcription, elongation IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0044764 multi-organism cellular process IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
BP GO:0051606 detection of stimulus IEP Enrichment
BP GO:0051704 multi-organism process IEP Enrichment
BP GO:0060245 detection of cell density IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR000456 Ribosomal_L17 16 128
No external refs found!