Description : ABC transporter, ATP-binding/permease protein [Ensembl]. ABC transporter transmembrane region [Interproscan].

Gene families : OG_02_0000006 (OrthoFinder) Phylogenetic Tree(s): OG0000006_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: CCG27495
Cluster HCAA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
AEA93208 OG1RF_10521 ABC superfamily ATP binding cassette transporter,... 0.03 OrthoFinder
AEA93209 OG1RF_10522 multidrug resistance ABC superfamily ATP binding... 0.04 OrthoFinder
AEA94129 mdlB, OG1RF_11442 multidrug ABC superfamily ATP binding cassette... 0.05 OrthoFinder
AEA94130 mdlA, OG1RF_11443 multidrug ABC superfamily ATP binding cassette... 0.06 OrthoFinder
AKI48785 L2625_00857 ABC transporter, ATP-binding/permease protein [Ensembl].... 0.02 OrthoFinder
CCP44106 irtA, Rv1348 Iron-regulated transporter IrtA [Ensembl].... 0.02 OrthoFinder
CCP44107 irtB, Rv1349 Iron-regulated transporter IrtB [Ensembl]. ABC... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004089 carbonate dehydratase activity IEP Enrichment
MF GO:0016835 carbon-oxygen lyase activity IEP Enrichment
MF GO:0016836 hydro-lyase activity IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 356 505
IPR011527 ABC1_TM_dom 23 291
No external refs found!