Description : DNA topoisomerase I [Ensembl]. Toprim domain, DNA topoisomerase, Topoisomerase DNA binding C4 zinc finger [Interproscan].
Gene families : OG_02_0000393 (OrthoFinder) Phylogenetic Tree(s): OG0000393_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: CCG27509 | |
Cluster | HCAA: Cluster_11 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AAK99944 | spr1141, topA | DNA topoisomerase I [Ensembl]. Toprim domain, DNA... | 0.05 | OrthoFinder | |
AAL20632 | STM1714, topA | DNA topoisomerase type I, omega protein [Ensembl].... | 0.08 | OrthoFinder | |
ADK86690 | topA, MPNE_0293 | DNA topoisomerase I [Ensembl]. Toprim domain [Interproscan]. | 0.03 | OrthoFinder | |
AGT24669 | N559_3006 | DNA topoisomerase I [Ensembl]. Toprim domain [InterProScan]. | 0.06 | OrthoFinder | |
AHY40871 | CJ8421_08495 | DNA topoisomerase I [Ensembl]. Toprim domain, DNA... | 0.03 | OrthoFinder | |
AKI49271 | topA, L2625_01365 | DNA topoisomerase I [Ensembl]. TOPRIM domain, DNA... | 0.04 | OrthoFinder | |
CRO91125 | topA_2 | DNA topoisomerase 1 [Ensembl]. Toprim domain, DNA... | 0.03 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
MF | GO:0003916 | DNA topoisomerase activity | IEA | Interproscan |
CC | GO:0005694 | chromosome | IEA | Interproscan |
BP | GO:0006265 | DNA topological change | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000921 | septin ring assembly | IEP | Enrichment |
MF | GO:0003723 | RNA binding | IEP | Enrichment |
MF | GO:0003735 | structural constituent of ribosome | IEP | Enrichment |
MF | GO:0004826 | phenylalanine-tRNA ligase activity | IEP | Enrichment |
MF | GO:0005198 | structural molecule activity | IEP | Enrichment |
CC | GO:0005840 | ribosome | IEP | Enrichment |
CC | GO:0005856 | cytoskeleton | IEP | Enrichment |
CC | GO:0005940 | septin ring | IEP | Enrichment |
BP | GO:0006412 | translation | IEP | Enrichment |
BP | GO:0006518 | peptide metabolic process | IEP | Enrichment |
BP | GO:0007010 | cytoskeleton organization | IEP | Enrichment |
MF | GO:0008312 | 7S RNA binding | IEP | Enrichment |
BP | GO:0009058 | biosynthetic process | IEP | Enrichment |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | Enrichment |
BP | GO:0016070 | RNA metabolic process | IEP | Enrichment |
MF | GO:0016866 | intramolecular transferase activity | IEP | Enrichment |
BP | GO:0019538 | protein metabolic process | IEP | Enrichment |
BP | GO:0031106 | septin ring organization | IEP | Enrichment |
CC | GO:0032156 | septin cytoskeleton | IEP | Enrichment |
BP | GO:0032185 | septin cytoskeleton organization | IEP | Enrichment |
BP | GO:0032784 | regulation of DNA-templated transcription, elongation | IEP | Enrichment |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Enrichment |
BP | GO:0043043 | peptide biosynthetic process | IEP | Enrichment |
BP | GO:0043603 | cellular amide metabolic process | IEP | Enrichment |
BP | GO:0043604 | amide biosynthetic process | IEP | Enrichment |
BP | GO:0044249 | cellular biosynthetic process | IEP | Enrichment |
BP | GO:0044267 | cellular protein metabolic process | IEP | Enrichment |
BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Enrichment |
CC | GO:0048500 | signal recognition particle | IEP | Enrichment |
BP | GO:0070925 | organelle assembly | IEP | Enrichment |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Enrichment |
BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Enrichment |
BP | GO:1901576 | organic substance biosynthetic process | IEP | Enrichment |
CC | GO:1990904 | ribonucleoprotein complex | IEP | Enrichment |
No external refs found! |