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Description : Exodeoxyribonuclease III [Ensembl]. Endonuclease/Exonuclease/phosphatase family [Interproscan].
Gene families : OG_02_0000433 (OrthoFinder) Phylogenetic Tree(s): OG0000433_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: CCG27537 | |
| Cluster | HCAA: Cluster_4 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AAL00463 | spr1660, exoA | Exodeoxyribonuclease [Ensembl].... | 0.04 | OrthoFinder | |
| AGT24724 | N559_3061 | exonuclease III [Ensembl].... | 0.05 | OrthoFinder | |
| AKP14969 | exoA, WX61_00906 | Exodeoxyribonuclease [Ensembl].... | 0.03 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEP | Enrichment |
| MF | GO:0003746 | translation elongation factor activity | IEP | Enrichment |
| MF | GO:0004180 | carboxypeptidase activity | IEP | Enrichment |
| MF | GO:0004185 | serine-type carboxypeptidase activity | IEP | Enrichment |
| MF | GO:0005488 | binding | IEP | Enrichment |
| MF | GO:0005506 | iron ion binding | IEP | Enrichment |
| BP | GO:0006396 | RNA processing | IEP | Enrichment |
| BP | GO:0006399 | tRNA metabolic process | IEP | Enrichment |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | Enrichment |
| BP | GO:0007154 | cell communication | IEP | Enrichment |
| BP | GO:0007267 | cell-cell signaling | IEP | Enrichment |
| MF | GO:0008168 | methyltransferase activity | IEP | Enrichment |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | Enrichment |
| MF | GO:0009002 | serine-type D-Ala-D-Ala carboxypeptidase activity | IEP | Enrichment |
| BP | GO:0009372 | quorum sensing | IEP | Enrichment |
| BP | GO:0009595 | detection of biotic stimulus | IEP | Enrichment |
| BP | GO:0009607 | response to biotic stimulus | IEP | Enrichment |
| BP | GO:0016070 | RNA metabolic process | IEP | Enrichment |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Enrichment |
| BP | GO:0023052 | signaling | IEP | Enrichment |
| BP | GO:0043038 | amino acid activation | IEP | Enrichment |
| BP | GO:0043039 | tRNA aminoacylation | IEP | Enrichment |
| MF | GO:0043167 | ion binding | IEP | Enrichment |
| BP | GO:0044764 | multi-organism cellular process | IEP | Enrichment |
| BP | GO:0051606 | detection of stimulus | IEP | Enrichment |
| BP | GO:0051704 | multi-organism process | IEP | Enrichment |
| BP | GO:0060245 | detection of cell density | IEP | Enrichment |
| MF | GO:0070008 | serine-type exopeptidase activity | IEP | Enrichment |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Enrichment |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Enrichment |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR005135 | Endo/exonuclease/phosphatase | 5 | 248 |
| No external refs found! |