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CCG27595


Description : Putative ABC transporter (ATP-binding protein),spy1791 homolog [Ensembl]. ABC transporter transmembrane region [Interproscan].


Gene families : OG_02_0000006 (OrthoFinder) Phylogenetic Tree(s): OG0000006_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCG27595
Cluster HCAA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AAL00019 spr1215, ABC-N/P ABC transporter ATP-binding/membrane-spanning... 0.03 OrthoFinder
AAL00020 spr1216, ABC-N/P ABC transporter ATP-binding/membrane-spanning... 0.03 OrthoFinder
AAL00093 spr1289, ABC-N/P ABC transporter ATP-binding/membrane-spanning... 0.04 OrthoFinder
AAL00094 spr1290, ABC-N/P ABC transporter ATP-binding/membrane-spanning... 0.04 OrthoFinder
AEA94658 OG1RF_11971 multidrug resistance ABC superfamily ATP binding... 0.03 OrthoFinder
AEA94659 OG1RF_11972 multidrug resistance ABC superfamily ATP binding... 0.03 OrthoFinder
AHY40018 CJ8421_03945 Phospholipid-lipopolysaccharide ABC transporter... 0.02 OrthoFinder
KNA52473 VCV51_030135 ABC-type multidrug efflux pump [Ensembl]. ABC... 0.06 OrthoFinder
KNA59439 VCV51_031273, MsbA lipid A export permease/ATP-binding protein MsbA... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005887 integral component of plasma membrane IEP Enrichment
BP GO:0009405 obsolete pathogenesis IEP Enrichment
CC GO:0031226 intrinsic component of plasma membrane IEP Enrichment
CC GO:0043190 ATP-binding cassette (ABC) transporter complex IEP Enrichment
CC GO:0098533 ATPase dependent transmembrane transport complex IEP Enrichment
CC GO:0098797 plasma membrane protein complex IEP Enrichment
CC GO:1902495 transmembrane transporter complex IEP Enrichment
CC GO:1904949 ATPase complex IEP Enrichment
CC GO:1990351 transporter complex IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 360 508
IPR011527 ABC1_TM_dom 35 300
No external refs found!