- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : MsmF
Description : Multiple sugar ABC transporter, membrane-spanning permease protein MsmF [Ensembl]. Binding-protein-dependent transport system inner membrane component [Interproscan].
Gene families : OG_02_0002187 (OrthoFinder) Phylogenetic Tree(s): OG0002187_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: CCG27659 | |
| Cluster | HCAA: Cluster_12 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AAK98885 | spr0081, ABC-MSP | ABC transporter membrane-spanning permease-sugar... | 0.1 | OrthoFinder | |
| AEA93690 | OG1RF_11003 | ABC superfamily ATP binding cassette transporter,... | 0.05 | OrthoFinder | |
| AEA94450 | OG1RF_11763 | ABC superfamily ATP binding cassette transporter,... | 0.06 | OrthoFinder | |
| AKI50004 | L2625_02157 | ABC transporter, permease protein [Ensembl]. ABC... | 0.06 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0016020 | membrane | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Enrichment |
| MF | GO:0003824 | catalytic activity | IEP | Enrichment |
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Enrichment |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | Enrichment |
| BP | GO:0008643 | carbohydrate transport | IEP | Enrichment |
| MF | GO:0008982 | protein-N(PI)-phosphohistidine-sugar phosphotransferase activity | IEP | Enrichment |
| BP | GO:0009401 | phosphoenolpyruvate-dependent sugar phosphotransferase system | IEP | Enrichment |
| MF | GO:0015144 | carbohydrate transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0016491 | oxidoreductase activity | IEP | Enrichment |
| MF | GO:0016597 | amino acid binding | IEP | Enrichment |
| MF | GO:0016740 | transferase activity | IEP | Enrichment |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Enrichment |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | Enrichment |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Enrichment |
| BP | GO:0019725 | cellular homeostasis | IEP | Enrichment |
| MF | GO:0022804 | active transmembrane transporter activity | IEP | Enrichment |
| BP | GO:0042592 | homeostatic process | IEP | Enrichment |
| BP | GO:0050789 | regulation of biological process | IEP | Enrichment |
| BP | GO:0050794 | regulation of cellular process | IEP | Enrichment |
| BP | GO:0065007 | biological regulation | IEP | Enrichment |
| BP | GO:0065008 | regulation of biological quality | IEP | Enrichment |
| BP | GO:0071702 | organic substance transport | IEP | Enrichment |
| MF | GO:0140110 | transcription regulator activity | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000515 | MetI-like | 104 | 309 |
| No external refs found! |