CCL19825 (BN171_3520011)


Aliases : BN171_3520011

Description : Two-component response regulator [Ensembl]. Response regulator receiver domain, Transcriptional regulatory protein [Interproscan].


Gene families : OG_02_0000001 (OrthoFinder) Phylogenetic Tree(s): OG0000001_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCL19825
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
AAC76061 qseB, b3025 quorum sensing DNA-binding response regulator in... 0.02 OrthoFinder
AAK98880 spr0076, rr08 Response regulator [Ensembl]. Transcriptional regulatory... 0.03 OrthoFinder
AAK99332 spr0528, vncR VncR, response regulator [Ensembl]. Transcriptional... 0.03 OrthoFinder
AAL00695 spr1893, phoP Response regulator [Ensembl]. Transcriptional regulatory... 0.04 OrthoFinder
AAL22899 STM4059, cpxR response reguator in two-component regulatory system... 0.02 OrthoFinder
AKP15489 ompR, WX61_01443 Transcriptional regulatory protein OmpR [Ensembl].... 0.03 OrthoFinder
CCL16989 BN171_1060003 Two-component response regulator [Ensembl]. Response... 0.04 OrthoFinder
CPC70217 vicR, ERS093114_01104 Two-component response regulator [Ensembl].... 0.02 OrthoFinder
CPD21777 hssR, ERS093114_02323 two-component response regulator [Ensembl].... 0.03 OrthoFinder
CRO52494 czcR_1 Transcriptional activator protein CzcR [Ensembl].... 0.02 OrthoFinder
CRP58313 czcR_4 Transcriptional activator protein CzcR [Ensembl].... 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEP Enrichment
MF GO:0004347 glucose-6-phosphate isomerase activity IEP Enrichment
MF GO:0008509 anion transmembrane transporter activity IEP Enrichment
MF GO:0008705 methionine synthase activity IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Enrichment
MF GO:0015109 chromate transmembrane transporter activity IEP Enrichment
MF GO:0034061 DNA polymerase activity IEP Enrichment
MF GO:0042084 5-methyltetrahydrofolate-dependent methyltransferase activity IEP Enrichment
InterPro domains Description Start Stop
IPR001867 OmpR/PhoB-type_DNA-bd 157 232
IPR001789 Sig_transdc_resp-reg_receiver 9 117
UniProtKB U3X3S0