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  5. CCL20055

CCL20055 (BN171_3670038)


Aliases : BN171_3670038

Description : Two-component response regulator, CheY family [Ensembl]. Response regulator receiver domain, Transcriptional regulatory protein [Interproscan].


Gene families : OG_02_0000001 (OrthoFinder) Phylogenetic Tree(s): OG0000001_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCL20055
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AAC76061 qseB, b3025 quorum sensing DNA-binding response regulator in... 0.04 OrthoFinder
AAK98880 spr0076, rr08 Response regulator [Ensembl]. Transcriptional regulatory... 0.03 OrthoFinder
AAK99332 spr0528, vncR VncR, response regulator [Ensembl]. Transcriptional... 0.04 OrthoFinder
AAL22051 STM3177, ygiX putative transcriptional regulator [Ensembl]. Response... 0.03 OrthoFinder
AEA95222 OG1RF_12535 response regulator [Ensembl]. Response regulator... 0.03 OrthoFinder
AGT22192 N559_0379 osmolarity response regulator [Ensembl]. Response... 0.03 OrthoFinder
AGT25698 N559_4072, PhoB transcriptional regulator PhoB [Ensembl]. Response... 0.04 OrthoFinder
CCG26924 No alias Two-component system response regulator [Ensembl].... 0.04 OrthoFinder
CCL16989 BN171_1060003 Two-component response regulator [Ensembl]. Response... 0.08 OrthoFinder
CCL17829 vanR, BN171_1830003 Two-component response regulator [Ensembl]. Response... 0.05 OrthoFinder
CCL18024 BN171_2030010 Two-component response regulator [Ensembl]. Response... 0.04 OrthoFinder
CCL18125 kdpE, BN171_2100009 Two-component response regulator KdpE [Ensembl].... 0.04 OrthoFinder
CCL18738 BN171_260007 Two-component response regulator [Ensembl]. Response... 0.05 OrthoFinder
CCL19656 BN171_3350005 Two-component response regulator [Ensembl]. Response... 0.05 OrthoFinder
CCP43651 prrA, Rv0903c Two component response transcriptional regulatory... 0.02 OrthoFinder
CCP43777 kdpE, Rv1027c Probable transcriptional regulatory protein KdpE... 0.03 OrthoFinder
CPC31435 arlR, ERS093114_00002 Putative response regulator ArlR [Ensembl].... 0.03 OrthoFinder
CPC70217 vicR, ERS093114_01104 Two-component response regulator [Ensembl].... 0.04 OrthoFinder
CPD21777 hssR, ERS093114_02323 two-component response regulator [Ensembl].... 0.03 OrthoFinder
CRO19997 qseB_2 Transcriptional regulatory protein QseB [Ensembl].... 0.03 OrthoFinder
CRO52494 czcR_1 Transcriptional activator protein CzcR [Ensembl].... 0.05 OrthoFinder
CRP32671 czcR_3 Transcriptional activator protein CzcR [Ensembl].... 0.03 OrthoFinder
CRP43486 qseB_3 Transcriptional regulatory protein QseB [Ensembl].... 0.03 OrthoFinder
CRP58313 czcR_4 Transcriptional activator protein CzcR [Ensembl].... 0.04 OrthoFinder
KNA58243 VCV51_032751 response regulator receiver domain-containing protein... 0.03 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP Enrichment
CC GO:0005886 plasma membrane IEP Enrichment
MF GO:0008028 monocarboxylic acid transmembrane transporter activity IEP Enrichment
MF GO:0008745 N-acetylmuramoyl-L-alanine amidase activity IEP Enrichment
MF GO:0015225 biotin transmembrane transporter activity IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP Enrichment
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Enrichment
MF GO:0042887 amide transmembrane transporter activity IEP Enrichment
MF GO:0061783 peptidoglycan muralytic activity IEP Enrichment
MF GO:0090482 vitamin transmembrane transporter activity IEP Enrichment
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR001789 Sig_transdc_resp-reg_receiver 4 113
IPR001867 OmpR/PhoB-type_DNA-bd 144 221
UniProtKB U3X4I1