CCL20068 (BN171_3690012)

Aliases : BN171_3690012

Description : Two-component response regulator, CheY family [Ensembl]. Response regulator receiver domain, Transcriptional regulatory protein [Interproscan].

Gene families : OG_02_0000001 (OrthoFinder) Phylogenetic Tree(s): OG0000001_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: CCL20068
Cluster	HCCA: Cluster_12

Target	Alias	Description	ECC score	Gene Family Method
AAC75035	hprR, b1969	response regulator family protein [Ensembl]....	0.02	OrthoFinder
AAC76061	qseB, b3025	quorum sensing DNA-binding response regulator in...	0.01	OrthoFinder
AAK98880	spr0076, rr08	Response regulator [Ensembl]. Transcriptional regulatory...	0.03	OrthoFinder
AAK99910	spr1107, rr02	Response regulator [Ensembl]. Transcriptional regulatory...	0.04	OrthoFinder
AAL00695	spr1893, phoP	Response regulator [Ensembl]. Transcriptional regulatory...	0.04	OrthoFinder
AAL20028	STM1096, copR	Copper resistance transcriptional regulatory protein...	0.02	OrthoFinder
AEA92946	OG1RF_10259	response regulator [Ensembl]. Response regulator...	0.04	OrthoFinder
AEA94850	vanR, OG1RF_12163	response regulator [Ensembl]. Response regulator...	0.04	OrthoFinder
AEA95261	OG1RF_12574	response regulator [Ensembl]. Response regulator...	0.05	OrthoFinder
AGT25698	N559_4072, PhoB	transcriptional regulator PhoB [Ensembl]. Response...	0.04	OrthoFinder
AGT26042	N559_4437, CreB	DNA-binding response regulator CreB [Ensembl]. Response...	0.04	OrthoFinder
AGT26636	N559_5059, CpxR	DNA-binding transcriptional regulator CpxR [Ensembl]....	0.03	OrthoFinder
AHY40431	CJ8421_06120	DNA-binding response regulator [Ensembl]....	0.03	OrthoFinder
AKI49374	lisR, L2625_01474	two component response regulator [Ensembl]....	0.04	OrthoFinder
AKP15489	ompR, WX61_01443	Transcriptional regulatory protein OmpR [Ensembl]....	0.04	OrthoFinder
CCG27642	No alias	Two-component response regulator SA14-24 [Ensembl]....	0.03	OrthoFinder
CCL20251	BN171_390005	Two-component response regulator [Ensembl]. Response...	0.04	OrthoFinder
CCP46592	tcrX, Rv3765c	Probable two component transcriptional regulatory...	0.03	OrthoFinder
CPC70217	vicR, ERS093114_01104	Two-component response regulator [Ensembl]....	0.01	OrthoFinder
CRO52494	czcR_1	Transcriptional activator protein CzcR [Ensembl]....	0.01	OrthoFinder
CRO55563	arcA_1	Dye resistance protein [Ensembl]. Response regulator...	0.02	OrthoFinder
CRO87197	creB	Transcriptional regulatory protein CreB [Ensembl]....	0.02	OrthoFinder
CRO88807	walR_1	Transcriptional regulatory protein WalR [Ensembl]....	0.03	OrthoFinder
CRP27775	kdpE	KDP operon transcriptional regulatory protein KdpE...	0.02	OrthoFinder
CRP58313	czcR_4	Transcriptional activator protein CzcR [Ensembl]....	0.01	OrthoFinder
KNA55649	VCV51_033016	response regulator receiver domain-containing protein...	0.04	OrthoFinder
KNA60550	VCV51_032221	response regulator receiver domain-containing protein...	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003747	translation release factor activity	IEP	Enrichment
MF	GO:0004066	asparagine synthase (glutamine-hydrolyzing) activity	IEP	Enrichment
MF	GO:0004197	cysteine-type endopeptidase activity	IEP	Enrichment
MF	GO:0004347	glucose-6-phosphate isomerase activity	IEP	Enrichment
MF	GO:0005507	copper ion binding	IEP	Enrichment
BP	GO:0006415	translational termination	IEP	Enrichment
MF	GO:0008079	translation termination factor activity	IEP	Enrichment
MF	GO:0008233	peptidase activity	IEP	Enrichment
MF	GO:0008234	cysteine-type peptidase activity	IEP	Enrichment
MF	GO:0008705	methionine synthase activity	IEP	Enrichment
MF	GO:0008762	UDP-N-acetylmuramate dehydrogenase activity	IEP	Enrichment
CC	GO:0016020	membrane	IEP	Enrichment
BP	GO:0017038	protein import	IEP	Enrichment
BP	GO:0022411	cellular component disassembly	IEP	Enrichment
BP	GO:0032984	protein-containing complex disassembly	IEP	Enrichment
MF	GO:0042084	5-methyltetrahydrofolate-dependent methyltransferase activity	IEP	Enrichment
BP	GO:0043624	cellular protein complex disassembly	IEP	Enrichment
BP	GO:0043933	protein-containing complex subunit organization	IEP	Enrichment
MF	GO:0046914	transition metal ion binding	IEP	Enrichment
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR001867	OmpR/PhoB-type_DNA-bd	152	228
IPR001789	Sig_transdc_resp-reg_receiver	5	113

External Links

UniProtKB	U3X1F4

CCL20068 (BN171_3690012)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation