CCL20120 (licB, BN171_3690064)

Aliases : licB, BN171_3690064

Description : PTS system, lichenan-specific IIB component [Ensembl]. PTS system [Interproscan].

Gene families : OG_02_0000061 (OrthoFinder) Phylogenetic Tree(s): OG0000061_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: CCL20120
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AAK99034 spr0230, PTS-EIIB Phosphotransferase system sugar-specific EIIB component... 0.04 OrthoFinder
AAK99082 spr0278, PTS-EII Phosphotransferase system sugar-specific EII component... 0.06 OrthoFinder
AAL00638 spr1835, ptcB Phosphotransferase system system, cellobiose-specific... 0.05 OrthoFinder
AEA93623 celA4, OG1RF_10936 PTS family porter, enzyme I [Ensembl]. PTS system [Interproscan]. 0.03 OrthoFinder
AGT22930 N559_1161 PTS system lactose/cellobiose specific IIB subunit [Ensembl]. 0.03 OrthoFinder
CCL19894 BN171_3590015 PTS system, lactose/cellobiose-family IIB component... 0.07 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0008982 protein-N(PI)-phosphohistidine-sugar phosphotransferase activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000150 DNA strand exchange activity IEP Enrichment
BP GO:0002097 tRNA wobble base modification IEP Enrichment
BP GO:0002100 tRNA wobble adenosine to inosine editing IEP Enrichment
BP GO:0006382 adenosine to inosine editing IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
BP GO:0016553 base conversion or substitution editing IEP Enrichment
InterPro domains Description Start Stop
IPR003501 PTS_EIIB_2/3 3 94
UniProtKB U3X4S3