1. Home
  2. Species
  3. Mycobacterium tuberculosis
  4. Sequence
  5. CCP42775

CCP42775 (rpsF, Rv0053)


Aliases : rpsF, Rv0053

Description : 30S ribosomal protein S6 RpsF [Ensembl]. Ribosomal protein S6 [Interproscan].


Gene families : OG_02_0000463 (OrthoFinder) Phylogenetic Tree(s): OG0000463_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCP42775
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
AAC77157 rpsF, b4200 30S ribosomal subunit protein S6 [Ensembl]. Ribosomal... 0.05 OrthoFinder
AAL00200 spr1396, rpsF 30S Ribosomal protein S6 (S6) [Ensembl]. Ribosomal... 0.05 OrthoFinder
AAL23211 STM4391, rpsF 30S ribosomal subunit protein S6 [Ensembl]. Ribosomal... 0.04 OrthoFinder
ADK86903 rpsF, MPNE_0260 ribosomal protein S6 [Ensembl]. Ribosomal protein S6... 0.02 OrthoFinder
AEA92694 rpsF, OG1RF_10007 30S ribosomal protein S6 [Ensembl]. Ribosomal protein S6... 0.06 OrthoFinder
AGT26292 N559_4700 30S ribosomal protein S6 [Ensembl]. 0.02 OrthoFinder
AHY40276 rpsF, CJ8421_05320 30S ribosomal protein S6 [Ensembl]. Ribosomal protein S6... 0.06 OrthoFinder
AKI48020 rpsF, L2625_00045 ribosomal protein S6 [Ensembl]. Ribosomal protein S6... 0.03 OrthoFinder
CBI65791 rpsF, HPB8_234 small subunit ribosomal protein S6 [Ensembl]. Ribosomal... 0.04 OrthoFinder
CCG26824 No alias SSU ribosomal protein S6p [Ensembl]. Ribosomal protein... 0.04 OrthoFinder
CPC89773 rpsF, ERS093114_01562 30S ribosomalprotein S6p [Ensembl]. Ribosomal protein S6... 0.04 OrthoFinder
CRO54025 rpsF 30S ribosomal protein S6 [Ensembl]. Ribosomal protein S6... 0.04 OrthoFinder
EDJ91444 rpsF, CGSHi22421_06732 30S ribosomal protein S6 [Ensembl]. Ribosomal protein S6... 0.02 OrthoFinder
KNA49059 VCV51_033834 ribosomal protein S6 [Ensembl]. Ribosomal protein S6... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
MF GO:0019843 rRNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Enrichment
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Enrichment
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
BP GO:0005976 polysaccharide metabolic process IEP Enrichment
MF GO:0008097 5S rRNA binding IEP Enrichment
MF GO:0008171 O-methyltransferase activity IEP Enrichment
MF GO:0008194 UDP-glycosyltransferase activity IEP Enrichment
MF GO:0008767 UDP-galactopyranose mutase activity IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
BP GO:0018193 peptidyl-amino acid modification IEP Enrichment
BP GO:0018208 peptidyl-proline modification IEP Enrichment
InterPro domains Description Start Stop
IPR000529 Ribosomal_S6 4 92
No external refs found!