CCP43460 (rplE, Rv0716)


Aliases : rplE, Rv0716

Description : 50S ribosomal protein L5 RplE [Ensembl]. Ribosomal protein L5, ribosomal L5P family C-terminus [Interproscan].


Gene families : OG_02_0000397 (OrthoFinder) Phylogenetic Tree(s): OG0000397_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCP43460
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
AAC76333 rplE, b3308 50S ribosomal subunit protein L5 [Ensembl]. Ribosomal... 0.18 OrthoFinder
AAK99005 spr0201, rplE 50S Ribosomal protein L5 [Ensembl]. Ribosomal protein... 0.14 OrthoFinder
AAL22291 STM3428, rplE 50S ribosomal subunit protein L5 [Ensembl]. Ribosomal... 0.2 OrthoFinder
ADK86675 rplE, MPNE_0206 ribosomal protein L5 [Ensembl]. Ribosomal protein L5,... 0.09 OrthoFinder
AEA92850 rplE, OG1RF_10163 50S ribosomal protein L5 [Ensembl]. Ribosomal protein... 0.16 OrthoFinder
AGT22254 N559_0446 50S ribosomal protein L5 [Ensembl]. ribosomal L5P family... 0.11 OrthoFinder
AHY40880 rplE, CJ8421_08540 50S ribosomal protein L5 [Ensembl]. Ribosomal protein... 0.18 OrthoFinder
AKI50555 rplE, L2625_02765 ribosomal protein L5 [Ensembl]. Ribosomal protein L5... 0.14 OrthoFinder
AKP15135 rplE, WX61_01081 50S ribosomal protein L5 [Ensembl]. Ribosomal protein... 0.06 OrthoFinder
CBI65729 rplE, HPB8_172 large subunit ribosomal protein L5 [Ensembl]. Ribosomal... 0.07 OrthoFinder
CCG27391 No alias LSU ribosomal protein L5p (L11e) [Ensembl]. Ribosomal... 0.11 OrthoFinder
CCL20575 rplE, BN171_70015 50S ribosomal protein L5 [Ensembl]. ribosomal L5P family... 0.14 OrthoFinder
CPD13923 rplE, ERS093114_02134 50S ribosomal protein L5 [Ensembl]. Ribosomal protein... 0.17 OrthoFinder
CRO74099 rplE 50S ribosomal protein L5 [Ensembl]. Ribosomal protein... 0.16 OrthoFinder
EDJ91368 rplE, CGSHi22421_04673 50S ribosomal protein L5 [Ensembl]. Ribosomal protein... 0.16 OrthoFinder
KNA54984 VCV51_033167 ribosomal L5P family protein [Ensembl]. Ribosomal... 0.13 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0003746 translation elongation factor activity IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0003908 methylated-DNA-[protein]-cysteine S-methyltransferase activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004140 dephospho-CoA kinase activity IEP Enrichment
MF GO:0004455 ketol-acid reductoisomerase activity IEP Enrichment
MF GO:0004526 ribonuclease P activity IEP Enrichment
MF GO:0004549 tRNA-specific ribonuclease activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006414 translational elongation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006633 fatty acid biosynthetic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008649 rRNA methyltransferase activity IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009081 branched-chain amino acid metabolic process IEP Enrichment
BP GO:0009082 branched-chain amino acid biosynthetic process IEP Enrichment
BP GO:0009273 peptidoglycan-based cell wall biogenesis IEP Enrichment
BP GO:0009403 toxin biosynthetic process IEP Enrichment
BP GO:0009404 toxin metabolic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0015936 coenzyme A metabolic process IEP Enrichment
BP GO:0015937 coenzyme A biosynthetic process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016790 thiolester hydrolase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
BP GO:0019748 secondary metabolic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
MF GO:0032977 membrane insertase activity IEP Enrichment
BP GO:0033866 nucleoside bisphosphate biosynthetic process IEP Enrichment
BP GO:0034030 ribonucleoside bisphosphate biosynthetic process IEP Enrichment
BP GO:0034033 purine nucleoside bisphosphate biosynthetic process IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0042546 cell wall biogenesis IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0044550 secondary metabolite biosynthetic process IEP Enrichment
MF GO:0052636 arabinosyltransferase activity IEP Enrichment
BP GO:0071554 cell wall organization or biogenesis IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0071766 Actinobacterium-type cell wall biogenesis IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
MF GO:0140102 catalytic activity, acting on a rRNA IEP Enrichment
MF GO:0140104 molecular carrier activity IEP Enrichment
MF GO:0140597 protein carrier activity IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR031309 Ribosomal_L5_C 91 184
IPR031310 Ribosomal_L5_N 31 87
No external refs found!