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  5. CCP43784

CCP43784 (trcR, Rv1033c)


Aliases : trcR, Rv1033c

Description : Two component transcriptional regulator TrcR [Ensembl]. Transcriptional regulatory protein, Response regulator receiver domain [Interproscan].


Gene families : OG_02_0000001 (OrthoFinder) Phylogenetic Tree(s): OG0000001_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCP43784
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
AAC74680 rstA, b1608 response regulator of RstAB two-component system... 0.03 OrthoFinder
AAC75035 hprR, b1969 response regulator family protein [Ensembl].... 0.03 OrthoFinder
AAC76061 qseB, b3025 quorum sensing DNA-binding response regulator in... 0.05 OrthoFinder
AAC77074 basR, b4113 response regulator in two-component regulatory system... 0.03 OrthoFinder
AAL20028 STM1096, copR Copper resistance transcriptional regulatory protein... 0.03 OrthoFinder
AAL22051 STM3177, ygiX putative transcriptional regulator [Ensembl]. Response... 0.04 OrthoFinder
AAL22364 STM3502, ompR response regulator in two-component regulatory system... 0.03 OrthoFinder
AAL23116 STM4292, basR response regulator in two-component regulatory system... 0.03 OrthoFinder
AEA95222 OG1RF_12535 response regulator [Ensembl]. Response regulator... 0.02 OrthoFinder
AGT25177 N559_3529, BasR DNA-binding transcriptional regulator BasR [Ensembl].... 0.03 OrthoFinder
CCL16989 BN171_1060003 Two-component response regulator [Ensembl]. Response... 0.03 OrthoFinder
CCL19656 BN171_3350005 Two-component response regulator [Ensembl]. Response... 0.03 OrthoFinder
CPC31435 arlR, ERS093114_00002 Putative response regulator ArlR [Ensembl].... 0.04 OrthoFinder
CPC70217 vicR, ERS093114_01104 Two-component response regulator [Ensembl].... 0.05 OrthoFinder
CRO38230 rstA Transcriptional regulatory protein RstA [Ensembl].... 0.03 OrthoFinder
CRO52494 czcR_1 Transcriptional activator protein CzcR [Ensembl].... 0.05 OrthoFinder
CRO55563 arcA_1 Dye resistance protein [Ensembl]. Response regulator... 0.03 OrthoFinder
CRP43486 qseB_3 Transcriptional regulatory protein QseB [Ensembl].... 0.04 OrthoFinder
CRP45027 ompR_4 Transcriptional regulatory protein OmpR [Ensembl].... 0.03 OrthoFinder
CRP58313 czcR_4 Transcriptional activator protein CzcR [Ensembl].... 0.04 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Enrichment
MF GO:0004089 carbonate dehydratase activity IEP Enrichment
MF GO:0004673 protein histidine kinase activity IEP Enrichment
BP GO:0006813 potassium ion transport IEP Enrichment
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Enrichment
MF GO:0019239 deaminase activity IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
MF GO:0140299 small molecule sensor activity IEP Enrichment
InterPro domains Description Start Stop
IPR001789 Sig_transdc_resp-reg_receiver 34 143
IPR001867 OmpR/PhoB-type_DNA-bd 179 253
UniProtKB L7N689