CCP44009 (deaD, Rv1253)

Aliases : deaD, Rv1253

Description : Probable cold-shock DeaD-box protein A homolog DeaD (ATP-dependent RNA helicase dead homolog) [Ensembl]. DEAD/DEAH box helicase, DbpA RNA binding domain, Helicase conserved C-terminal domain [Interproscan].

Gene families : OG_02_0000033 (OrthoFinder) Phylogenetic Tree(s): OG0000033_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: CCP44009
Cluster	HCCA: Cluster_44

Target	Alias	Description	ECC score	Gene Family Method	Actions
ADK86977	MPNE_0728	DEAD/DEAH box helicase [Ensembl]. DEAD/DEAH box helicase...	0.02	OrthoFinder
CRO01721	rhlB	ATP-dependent RNA helicase RhlB [Ensembl]. DEAD/DEAH box...	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004424	imidazoleglycerol-phosphate dehydratase activity	IEP	Enrichment
BP	GO:0009060	aerobic respiration	IEP	Enrichment
BP	GO:0015969	guanosine tetraphosphate metabolic process	IEP	Enrichment
BP	GO:0015980	energy derivation by oxidation of organic compounds	IEP	Enrichment
BP	GO:0019646	aerobic electron transport chain	IEP	Enrichment
MF	GO:0019842	vitamin binding	IEP	Enrichment
BP	GO:0022900	electron transport chain	IEP	Enrichment
BP	GO:0022904	respiratory electron transport chain	IEP	Enrichment
MF	GO:0030976	thiamine pyrophosphate binding	IEP	Enrichment
BP	GO:0033865	nucleoside bisphosphate metabolic process	IEP	Enrichment
BP	GO:0033875	ribonucleoside bisphosphate metabolic process	IEP	Enrichment
BP	GO:0034032	purine nucleoside bisphosphate metabolic process	IEP	Enrichment
BP	GO:0034035	purine ribonucleoside bisphosphate metabolic process	IEP	Enrichment
BP	GO:0045333	cellular respiration	IEP	Enrichment
BP	GO:0045454	cell redox homeostasis	IEP	Enrichment
CC	GO:0070069	cytochrome complex	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR001650	Helicase_C	237	345
IPR005580	DbpA/CsdA_RNA-bd_dom	471	538
IPR011545	DEAD/DEAH_box_helicase_dom	37	203

External Links

No external refs found!

CCP44009 (deaD, Rv1253)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation