CCP44106 (irtA, Rv1348)

Aliases : irtA, Rv1348

Description : Iron-regulated transporter IrtA [Ensembl]. Siderophore-interacting protein, ABC transporter transmembrane region, Siderophore-interacting FAD-binding domain [Interproscan].

Gene families : OG_02_0000006 (OrthoFinder) Phylogenetic Tree(s): OG0000006_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: CCP44106
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
AAC73552 mdlB, b0449 putative multidrug ABC transporter ATPase [Ensembl]. ABC... 0.03 OrthoFinder
AAL00460 spr1657, ABC-N/P ABC transporter ATP-binding/membrane spanning... 0.02 OrthoFinder
CCG27495 No alias ABC transporter, ATP-binding/permease protein [Ensembl].... 0.02 OrthoFinder
CRO74972 irtA Iron import ATP-binding/permease protein IrtA [Ensembl].... 0.03 OrthoFinder
CRO75001 irtB Iron import ATP-binding/permease protein IrtB [Ensembl].... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP Enrichment
MF GO:0003879 ATP phosphoribosyltransferase activity IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006547 histidine metabolic process IEP Enrichment
MF GO:0008194 UDP-glycosyltransferase activity IEP Enrichment
MF GO:0016597 amino acid binding IEP Enrichment
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP Enrichment
MF GO:0016757 glycosyltransferase activity IEP Enrichment
InterPro domains Description Start Stop
IPR007037 SIP_C 131 241
IPR013113 FAD-bd_9_SIP 61 113
IPR011527 ABC1_TM_dom 294 552
IPR003439 ABC_transporter-like_ATP-bd 627 774
No external refs found!