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  5. CCP44408

CCP44408 (rplT, Rv1643)


Aliases : rplT, Rv1643

Description : 50S ribosomal protein L20 RplT [Ensembl]. Ribosomal protein L20 [Interproscan].


Gene families : OG_02_0000432 (OrthoFinder) Phylogenetic Tree(s): OG0000432_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCP44408
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
AAC74786 rplT, b1716 50S ribosomal subunit protein L20 [Ensembl]. Ribosomal... 0.12 OrthoFinder
AAK99667 spr0863, rplT 50S Ribosomal protein L20 [Ensembl]. Ribosomal protein... 0.04 OrthoFinder
AAL20261 STM1336, rplT 50S ribosomal subunit protein L20 [Ensembl]. Ribosomal... 0.17 OrthoFinder
ADK87005 rplT, MPNE_0135 ribosomal protein L20 [Ensembl]. Ribosomal protein L20... 0.05 OrthoFinder
AEA93330 rplT, OG1RF_10643 50S ribosomal protein L20 [Ensembl]. Ribosomal protein... 0.07 OrthoFinder
AHY39505 rplT, CJ8421_01210 50S ribosomal protein L20 [Ensembl]. Ribosomal protein... 0.07 OrthoFinder
AKI49777 rplT, L2625_01922 ribosomal protein L20 [Ensembl]. Ribosomal protein L20... 0.06 OrthoFinder
AKP15673 rplT, WX61_01636 50S ribosomal protein L20 [Ensembl]. Ribosomal protein... 0.04 OrthoFinder
CCG26517 No alias LSU ribosomal protein L20p [Ensembl]. Ribosomal protein... 0.09 OrthoFinder
CPC85832 rplT, ERS093114_01500 50S ribosomal protein L20 [Ensembl]. Ribosomal protein... 0.27 OrthoFinder
CRO66872 rplT 50S ribosomal protein L20 [Ensembl]. Ribosomal protein... 0.17 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
MF GO:0019843 rRNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP Enrichment
MF GO:0003747 translation release factor activity IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0003908 methylated-DNA-[protein]-cysteine S-methyltransferase activity IEP Enrichment
MF GO:0004455 ketol-acid reductoisomerase activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006414 translational elongation IEP Enrichment
BP GO:0006415 translational termination IEP Enrichment
MF GO:0008079 translation termination factor activity IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
MF GO:0008172 S-methyltransferase activity IEP Enrichment
BP GO:0009081 branched-chain amino acid metabolic process IEP Enrichment
BP GO:0009082 branched-chain amino acid biosynthetic process IEP Enrichment
BP GO:0022411 cellular component disassembly IEP Enrichment
MF GO:0032977 membrane insertase activity IEP Enrichment
BP GO:0032984 protein-containing complex disassembly IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0043624 cellular protein complex disassembly IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
MF GO:0140104 molecular carrier activity IEP Enrichment
MF GO:0140597 protein carrier activity IEP Enrichment
InterPro domains Description Start Stop
IPR005813 Ribosomal_L20 3 109
No external refs found!