CCP45692 (rpsB, Rv2890c)

Aliases : rpsB, Rv2890c

Description : 30S ribosomal protein S2 RpsB [Ensembl]. Ribosomal protein S2 [Interproscan].

Gene families : OG_02_0000332 (OrthoFinder) Phylogenetic Tree(s): OG0000332_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: CCP45692
Cluster	HCCA: Cluster_25

Target	Alias	Description	ECC score	Gene Family Method
AAC73280	rpsB, b0169	30S ribosomal subunit protein S2 [Ensembl]. Ribosomal...	0.2	OrthoFinder
AAL00822	spr2020, rpsB	30S Ribosomal protein S2 [Ensembl]. Ribosomal protein S2...	0.18	OrthoFinder
AAL19180	STM0216, rpsB	30S ribosomal subunit protein S2 [Ensembl]. Ribosomal...	0.24	OrthoFinder
ADK87275	rpsB, MPNE_0240	ribosomal protein S2 [Ensembl]. Ribosomal protein S2...	0.05	OrthoFinder
AEA94520	rpsB, OG1RF_11833	30S ribosomal protein S2 [Ensembl]. Ribosomal protein S2...	0.09	OrthoFinder
AGT25854	N559_4232	30S ribosomal protein S2 [Ensembl].	0.05	OrthoFinder
AHY40386	rpsB, CJ8421_05895	30S ribosomal protein S2 [Ensembl]. Ribosomal protein S2...	0.17	OrthoFinder
AKI49655	rpsB, L2625_01768	ribosomal protein S2 [Ensembl]. Ribosomal protein S2...	0.06	OrthoFinder
AKP14987	rpsB, WX61_00924	30S ribosomal protein S2 [Ensembl]. Ribosomal protein S2...	0.08	OrthoFinder
CBI67239	rpsB, HPB8_1682	small subunit ribosomal protein S2 [Ensembl]. Ribosomal...	0.1	OrthoFinder
CCG26655	No alias	SSU ribosomal protein S2p (SAe) [Ensembl]. Ribosomal...	0.14	OrthoFinder
CCL18526	rpsB, BN171_2410008	30S ribosomal protein S2 [Ensembl]. Ribosomal protein S2...	0.09	OrthoFinder
CPC35319	rpsB, ERS093114_00168	30S ribosomal protein S2 [Ensembl]. Ribosomal protein S2...	0.04	OrthoFinder
CRO13952	rpsB	30S ribosomal protein S2 [Ensembl]. Ribosomal protein S2...	0.18	OrthoFinder
EDJ91697	secA, CGSHi22421_08078	preprotein translocase subunit SecA [Ensembl]. Ribosomal...	0.03	OrthoFinder
EDJ91698	CGSHi22421_08083	30S ribosomal protein S2 [Ensembl]. Ribosomal protein S2...	0.04	OrthoFinder
KNA52712	VCV51_031518	ribosomal protein S2 [Ensembl]. Ribosomal protein S2...	0.12	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000272	polysaccharide catabolic process	IEP	Enrichment
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEP	Enrichment
MF	GO:0003676	nucleic acid binding	IEP	Enrichment
MF	GO:0003723	RNA binding	IEP	Enrichment
MF	GO:0003746	translation elongation factor activity	IEP	Enrichment
MF	GO:0003899	DNA-directed 5'-3' RNA polymerase activity	IEP	Enrichment
MF	GO:0003924	GTPase activity	IEP	Enrichment
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Enrichment
MF	GO:0005525	GTP binding	IEP	Enrichment
BP	GO:0006073	cellular glucan metabolic process	IEP	Enrichment
BP	GO:0006351	transcription, DNA-templated	IEP	Enrichment
BP	GO:0006396	RNA processing	IEP	Enrichment
BP	GO:0006414	translational elongation	IEP	Enrichment
BP	GO:0009251	glucan catabolic process	IEP	Enrichment
BP	GO:0016070	RNA metabolic process	IEP	Enrichment
MF	GO:0016462	pyrophosphatase activity	IEP	Enrichment
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Enrichment
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	Enrichment
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	Enrichment
MF	GO:0017111	nucleoside-triphosphatase activity	IEP	Enrichment
BP	GO:0018193	peptidyl-amino acid modification	IEP	Enrichment
BP	GO:0018208	peptidyl-proline modification	IEP	Enrichment
MF	GO:0019001	guanyl nucleotide binding	IEP	Enrichment
MF	GO:0019843	rRNA binding	IEP	Enrichment
BP	GO:0030243	cellulose metabolic process	IEP	Enrichment
BP	GO:0030245	cellulose catabolic process	IEP	Enrichment
MF	GO:0032561	guanyl ribonucleotide binding	IEP	Enrichment
MF	GO:0034062	5'-3' RNA polymerase activity	IEP	Enrichment
BP	GO:0044042	glucan metabolic process	IEP	Enrichment
BP	GO:0044247	cellular polysaccharide catabolic process	IEP	Enrichment
BP	GO:0044264	cellular polysaccharide metabolic process	IEP	Enrichment
BP	GO:0044275	cellular carbohydrate catabolic process	IEP	Enrichment
BP	GO:0051273	beta-glucan metabolic process	IEP	Enrichment
BP	GO:0051275	beta-glucan catabolic process	IEP	Enrichment
MF	GO:0097159	organic cyclic compound binding	IEP	Enrichment
BP	GO:0097659	nucleic acid-templated transcription	IEP	Enrichment
MF	GO:0097747	RNA polymerase activity	IEP	Enrichment
MF	GO:1901363	heterocyclic compound binding	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR001865	Ribosomal_S2	9	224

External Links

No external refs found!

CCP45692 (rpsB, Rv2890c)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation