CCP46187 (spoU, Rv3366)

Aliases : spoU, Rv3366

Description : Probable tRNA/rRNA methylase SpoU (tRNA/rRNA methyltransferase) [Ensembl]. SpoU rRNA Methylase family [Interproscan].

Gene families : OG_02_0000628 (OrthoFinder) Phylogenetic Tree(s): OG0000628_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: CCP46187
Cluster	HCCA: Cluster_12

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008168	methyltransferase activity	None	Extended
MF	GO:0008173	RNA methyltransferase activity	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016741	transferase activity, transferring one-carbon groups	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0002376	immune system process	IEP	Enrichment
BP	GO:0006304	DNA modification	IEP	Enrichment
BP	GO:0006952	defense response	IEP	Enrichment
BP	GO:0006955	immune response	IEP	Enrichment
BP	GO:0009307	DNA restriction-modification system	IEP	Enrichment
BP	GO:0009605	response to external stimulus	IEP	Enrichment
BP	GO:0009607	response to biotic stimulus	IEP	Enrichment
BP	GO:0010498	proteasomal protein catabolic process	IEP	Enrichment
BP	GO:0019941	modification-dependent protein catabolic process	IEP	Enrichment
BP	GO:0030163	protein catabolic process	IEP	Enrichment
BP	GO:0043207	response to external biotic stimulus	IEP	Enrichment
MF	GO:0043565	sequence-specific DNA binding	IEP	Enrichment
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	Enrichment
BP	GO:0044265	cellular macromolecule catabolic process	IEP	Enrichment
BP	GO:0044355	clearance of foreign intracellular DNA	IEP	Enrichment
BP	GO:0044419	biological process involved in interspecies interaction between organisms	IEP	Enrichment
BP	GO:0051603	proteolysis involved in cellular protein catabolic process	IEP	Enrichment
BP	GO:0051707	response to other organism	IEP	Enrichment
BP	GO:0098542	defense response to other organism	IEP	Enrichment
BP	GO:0099046	clearance of foreign intracellular nucleic acids	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR001537	SpoU_MeTrfase	2	142

External Links

UniProtKB	O50394