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  5. CCL20571

CCL20571 (rpmC, BN171_70011)


Aliases : rpmC, BN171_70011

Description : 50S ribosomal protein L29 [Ensembl]. Ribosomal L29 protein [Interproscan].


Gene families : OG_02_0000484 (OrthoFinder) Phylogenetic Tree(s): OG0000484_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCL20571
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AAC76337 rpmC, b3312 50S ribosomal subunit protein L29 [Ensembl]. Ribosomal... 0.24 OrthoFinder
AAK99001 spr0197, rpmC 50S Ribosomal protein L29 [Ensembl]. Ribosomal L29... 0.21 OrthoFinder
AAL22295 STM3432, rpmC 50S ribosomal subunit protein L29 [Ensembl]. Ribosomal... 0.25 OrthoFinder
AEA92846 rpmC, OG1RF_10159 50S ribosomal protein L29 [Ensembl]. Ribosomal L29... 0.09 OrthoFinder
AGT22250 N559_0442 50S ribosomal protein L29 [Ensembl]. 0.08 OrthoFinder
AHY40884 CJ8421_08560 50S ribosomal protein L29 [Ensembl]. Ribosomal L29... 0.12 OrthoFinder
AKI50559 rpmC, L2625_02769 ribosomal protein L29 [Ensembl]. Ribosomal protein... 0.1 OrthoFinder
AKP15131 rpmC, WX61_01077 50S ribosomal protein L29 [Ensembl]. Ribosomal L29... 0.1 OrthoFinder
CBI65725 rpmC, HPB8_168 large subunit ribosomal protein L2 [Ensembl]. Ribosomal... 0.03 OrthoFinder
CCG27387 No alias LSU ribosomal protein L29p (L35e) [Ensembl]. Ribosomal... 0.17 OrthoFinder
CCP43453 rpmC, Rv0709 50S ribosomal protein L29 RpmC [Ensembl]. Ribosomal L29... 0.09 OrthoFinder
CPD13781 rpmC, ERS093114_02130 50S ribosomal protein L29 [Ensembl]. Ribosomal L29... 0.21 OrthoFinder
CRO73990 rpmC 50S ribosomal protein L29 [Ensembl]. Ribosomal L29... 0.31 OrthoFinder
EDJ91362 CGSHi22421_04643 50S ribosomal protein L29 [Ensembl]. Ribosomal L29... 0.27 OrthoFinder
KNA54980 VCV51_033163 ribosomal L29 protein [Ensembl]. Ribosomal L29 protein... 0.22 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
MF GO:0010181 FMN binding IEP Enrichment
MF GO:0018836 alkylmercury lyase activity IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
MF GO:0046983 protein dimerization activity IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
InterPro domains Description Start Stop
IPR001854 Ribosomal_L29/L35 4 60
UniProtKB U3X2L6