CCL20581 (rpmD, BN171_70021)

Aliases : rpmD, BN171_70021

Description : 50S ribosomal protein L30 [Ensembl]. Ribosomal protein L30p/L7e [Interproscan].

Gene families : OG_02_0000682 (OrthoFinder) Phylogenetic Tree(s): OG0000682_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: CCL20581
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AAC76327 rpmD, b3302 50S ribosomal subunit protein L30 [Ensembl]. Ribosomal... 0.04 OrthoFinder
AEA92856 rpmD, OG1RF_10169 50S ribosomal protein L30 [Ensembl]. Ribosomal protein... 0.03 OrthoFinder
AKI50549 rpmD, L2625_02759 ribosomal protein L30 [Ensembl]. Ribosomal protein L30... 0.04 OrthoFinder
AKP15140 rpmD, WX61_01086 50S ribosomal protein L30 [Ensembl]. Ribosomal protein... 0.02 OrthoFinder
CCP43466 rpmD, Rv0722 50S ribosomal protein L30 RpmD [Ensembl]. Ribosomal... 0.05 OrthoFinder
CPD14133 rpmD, ERS093114_02140 50S ribosomal protein L30 [Ensembl]. Ribosomal protein... 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006109 regulation of carbohydrate metabolic process IEP Enrichment
BP GO:0006605 protein targeting IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0006935 chemotaxis IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
CC GO:0009288 bacterial-type flagellum IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
MF GO:0015298 solute:cation antiporter activity IEP Enrichment
MF GO:0015299 solute:proton antiporter activity IEP Enrichment
BP GO:0015833 peptide transport IEP Enrichment
BP GO:0017038 protein import IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
BP GO:0040011 locomotion IEP Enrichment
BP GO:0042330 taxis IEP Enrichment
BP GO:0042886 amide transport IEP Enrichment
CC GO:0042995 cell projection IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
InterPro domains Description Start Stop
IPR016082 Ribosomal_L30_ferredoxin-like 5 53
UniProtKB U3X2N8