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Aliases : rpmD, BN171_70021
Description : 50S ribosomal protein L30 [Ensembl]. Ribosomal protein L30p/L7e [Interproscan].
Gene families : OG_02_0000682 (OrthoFinder) Phylogenetic Tree(s): OG0000682_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: CCL20581 | |
| Cluster | HCCA: Cluster_2 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AAC76327 | rpmD, b3302 | 50S ribosomal subunit protein L30 [Ensembl]. Ribosomal... | 0.04 | OrthoFinder | |
| AEA92856 | rpmD, OG1RF_10169 | 50S ribosomal protein L30 [Ensembl]. Ribosomal protein... | 0.03 | OrthoFinder | |
| AKI50549 | rpmD, L2625_02759 | ribosomal protein L30 [Ensembl]. Ribosomal protein L30... | 0.04 | OrthoFinder | |
| AKP15140 | rpmD, WX61_01086 | 50S ribosomal protein L30 [Ensembl]. Ribosomal protein... | 0.02 | OrthoFinder | |
| CCP43466 | rpmD, Rv0722 | 50S ribosomal protein L30 RpmD [Ensembl]. Ribosomal... | 0.05 | OrthoFinder | |
| CPD14133 | rpmD, ERS093114_02140 | 50S ribosomal protein L30 [Ensembl]. Ribosomal protein... | 0.04 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEP | Enrichment |
| MF | GO:0003735 | structural constituent of ribosome | IEP | Enrichment |
| MF | GO:0003743 | translation initiation factor activity | IEP | Enrichment |
| MF | GO:0005198 | structural molecule activity | IEP | Enrichment |
| CC | GO:0005575 | cellular_component | IEP | Enrichment |
| CC | GO:0005840 | ribosome | IEP | Enrichment |
| BP | GO:0006109 | regulation of carbohydrate metabolic process | IEP | Enrichment |
| BP | GO:0006605 | protein targeting | IEP | Enrichment |
| BP | GO:0006886 | intracellular protein transport | IEP | Enrichment |
| BP | GO:0006935 | chemotaxis | IEP | Enrichment |
| BP | GO:0008104 | protein localization | IEP | Enrichment |
| CC | GO:0009288 | bacterial-type flagellum | IEP | Enrichment |
| BP | GO:0015031 | protein transport | IEP | Enrichment |
| MF | GO:0015298 | solute:cation antiporter activity | IEP | Enrichment |
| MF | GO:0015299 | solute:proton antiporter activity | IEP | Enrichment |
| BP | GO:0015833 | peptide transport | IEP | Enrichment |
| BP | GO:0017038 | protein import | IEP | Enrichment |
| BP | GO:0033036 | macromolecule localization | IEP | Enrichment |
| BP | GO:0040011 | locomotion | IEP | Enrichment |
| BP | GO:0042330 | taxis | IEP | Enrichment |
| BP | GO:0042886 | amide transport | IEP | Enrichment |
| CC | GO:0042995 | cell projection | IEP | Enrichment |
| CC | GO:0043226 | organelle | IEP | Enrichment |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | Enrichment |
| CC | GO:0043229 | intracellular organelle | IEP | Enrichment |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Enrichment |
| BP | GO:0045184 | establishment of protein localization | IEP | Enrichment |
| BP | GO:0046907 | intracellular transport | IEP | Enrichment |
| BP | GO:0051641 | cellular localization | IEP | Enrichment |
| BP | GO:0051649 | establishment of localization in cell | IEP | Enrichment |
| BP | GO:0071705 | nitrogen compound transport | IEP | Enrichment |
| CC | GO:0110165 | cellular anatomical entity | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR016082 | Ribosomal_L30_ferredoxin-like | 5 | 53 |
| UniProtKB | U3X2N8 |