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CRN66083 (fimA)


Aliases : fimA

Description : Serogroup A1 [Ensembl]. Type IV minor pilin ComP, Prokaryotic N-terminal methylation motif [Interproscan].


Gene families : OG_02_0000742 (OrthoFinder) Phylogenetic Tree(s): OG0000742_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CRN66083
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
AAC73219 ppdD, b0108 putative prepilin peptidase-dependent pilin [Ensembl].... 0.06 OrthoFinder
AKP14901 pilE1_4, WX61_00834 Fimbrial protein precursor [Ensembl]. Pilin (bacterial... 0.04 OrthoFinder
EDJ90498 CGSHi22421_06357 Type IV pilin subunit protein [Ensembl]. Pilin... 0.06 OrthoFinder
KNA56962 VCV51_032888 prepilin-type N-terminal cleavage/methylation... 0.11 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004455 ketol-acid reductoisomerase activity IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
BP GO:0009081 branched-chain amino acid metabolic process IEP Enrichment
BP GO:0009082 branched-chain amino acid biosynthetic process IEP Enrichment
BP GO:0009306 protein secretion IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
CC GO:0015627 type II protein secretion system complex IEP Enrichment
BP GO:0015628 protein secretion by the type II secretion system IEP Enrichment
BP GO:0032940 secretion by cell IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
BP GO:0035592 establishment of protein localization to extracellular region IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046903 secretion IEP Enrichment
BP GO:0071692 protein localization to extracellular region IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
BP GO:0071806 protein transmembrane transport IEP Enrichment
BP GO:0098776 protein transport across the cell outer membrane IEP Enrichment
BP GO:0140352 export from cell IEP Enrichment
InterPro domains Description Start Stop
IPR012902 N_methyl_site 3 27
IPR031982 PilE-like 29 117
Locus_tag PAERUG_E11_London_26_VIM_2_06_13_00129