CRN75164 (phnR_1)

Aliases : phnR_1

Description : Putative transcriptional regulator of 2-aminoethylphosphonate degradation operons [Ensembl]. UTRA domain, Bacterial regulatory proteins [Interproscan].

Gene families : OG_02_0000038 (OrthoFinder) Phylogenetic Tree(s): OG0000038_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: CRN75164
Cluster	HCCA: Cluster_52

Target	Alias	Description	ECC score	Gene Family Method
AKI48524	L2625_00589	transcriptional regulator, GntR family [Ensembl]....	0.06	OrthoFinder
AKI50142	L2625_02306	transcriptional regulator, GntR family [Ensembl]. UbiC...	0.04	OrthoFinder
CCG27116	No alias	Transcriptional regulator, GntR family [Ensembl]. UTRA...	0.04	OrthoFinder
CCL17152	BN171_1330013	Transcriptional regulator, GntR family [Ensembl]. UTRA...	0.03	OrthoFinder
CCL19902	BN171_3590023	Transcriptional regulator, GntR family [Ensembl]. UTRA...	0.06	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003725	double-stranded RNA binding	IEP	Enrichment
BP	GO:0032259	methylation	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR000524	Tscrpt_reg_HTH_GntR	9	69
IPR011663	UTRA	90	227

External Links

Locus_tag	PAERUG_E11_London_26_VIM_2_06_13_00435

CRN75164 (phnR_1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation