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Aliases : BN171_880009
Description : Transcriptional regulator, LacI family [Ensembl]. Periplasmic binding protein-like domain, Bacterial regulatory proteins [Interproscan].
Gene families : OG_02_0000021 (OrthoFinder) Phylogenetic Tree(s): OG0000021_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: CCL20673 | |
| Cluster | HCCA: Cluster_38 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AAC75876 | galR, b2837 | galactose-inducible d-galactose regulon transcriptional... | 0.03 | OrthoFinder | |
| AGT23411 | N559_1667, GalS | DNA-binding transcriptional regulator GalS [Ensembl].... | 0.03 | OrthoFinder | |
| AGT24235 | N559_2553 | putative periplasmic binding protein/LacI... | 0.03 | OrthoFinder | |
| EDJ90887 | CGSHi22421_03523 | HTH-type transcriptional repressor PurR [Ensembl].... | 0.03 | OrthoFinder | |
| KNA56019 | VCV51_030935 | lacI family Bacterial regulatory protein [Ensembl].... | 0.04 | OrthoFinder | |
| KNA60659 | VCV51_032098 | lacI family Bacterial regulatory protein [Ensembl].... | 0.04 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000156 | phosphorelay response regulator activity | IEP | Enrichment |
| BP | GO:0000160 | phosphorelay signal transduction system | IEP | Enrichment |
| MF | GO:0003678 | DNA helicase activity | IEP | Enrichment |
| MF | GO:0004519 | endonuclease activity | IEP | Enrichment |
| MF | GO:0004520 | endodeoxyribonuclease activity | IEP | Enrichment |
| MF | GO:0004536 | deoxyribonuclease activity | IEP | Enrichment |
| MF | GO:0005215 | transporter activity | IEP | Enrichment |
| BP | GO:0006259 | DNA metabolic process | IEP | Enrichment |
| BP | GO:0006281 | DNA repair | IEP | Enrichment |
| BP | GO:0006950 | response to stress | IEP | Enrichment |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | Enrichment |
| BP | GO:0007165 | signal transduction | IEP | Enrichment |
| MF | GO:0009378 | four-way junction helicase activity | IEP | Enrichment |
| CC | GO:0009379 | Holliday junction helicase complex | IEP | Enrichment |
| BP | GO:0009987 | cellular process | IEP | Enrichment |
| MF | GO:0015291 | secondary active transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0015297 | antiporter activity | IEP | Enrichment |
| MF | GO:0015298 | solute:cation antiporter activity | IEP | Enrichment |
| MF | GO:0015299 | solute:proton antiporter activity | IEP | Enrichment |
| MF | GO:0022857 | transmembrane transporter activity | IEP | Enrichment |
| CC | GO:0033202 | DNA helicase complex | IEP | Enrichment |
| BP | GO:0033554 | cellular response to stress | IEP | Enrichment |
| BP | GO:0035556 | intracellular signal transduction | IEP | Enrichment |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | Enrichment |
| BP | GO:0050896 | response to stimulus | IEP | Enrichment |
| BP | GO:0051716 | cellular response to stimulus | IEP | Enrichment |
| MF | GO:0060089 | molecular transducer activity | IEP | Enrichment |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Enrichment |
| CC | GO:1902494 | catalytic complex | IEP | Enrichment |
| CC | GO:1904949 | ATPase complex | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000843 | HTH_LacI | 15 | 60 |
| UniProtKB | U3X2N7 |