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  5. CRN95443

CRN95443 (epsF_1)


Aliases : epsF_1

Description : General secretion pathway protein F [Ensembl]. Type II secretion system (T2SS) [Interproscan].


Gene families : OG_02_0000229 (OrthoFinder) Phylogenetic Tree(s): OG0000229_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CRN95443
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AAC76352 gspF, b3327 general secretory pathway component, cryptic [Ensembl].... 0.03 OrthoFinder
AAL19106 STM0142, hofC putative component in type IV pilin biogenesis... 0.04 OrthoFinder
AGT25881 N559_4261 pullulanase-specific type II secretion system component... 0.04 OrthoFinder
AGT25934 N559_4321 type IV pilin biogenesis protein [Ensembl]. Type II... 0.04 OrthoFinder
AHY40649 CJ8421_07360 general secretory pathway protein F [Ensembl]. Type II... 0.03 OrthoFinder
CCL19980 BN171_3610023 Putative type IV pilus secretion protein [Ensembl]. Type... 0.03 OrthoFinder
CRN98329 epsF_2 General secretion pathway protein F [Ensembl]. Type II... 0.04 OrthoFinder
EDJ90500 CGSHi22421_06367 putative type IV pilin secretion protein [Ensembl]. Type... 0.03 OrthoFinder
KNA55102 VCV51_031834 general secretion pathway protein F [Ensembl]. Type II... 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000030 mannosyltransferase activity IEP Enrichment
MF GO:0000287 magnesium ion binding IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0004089 carbonate dehydratase activity IEP Enrichment
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
BP GO:0006486 protein glycosylation IEP Enrichment
BP GO:0006493 protein O-linked glycosylation IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0009294 DNA mediated transformation IEP Enrichment
BP GO:0009306 protein secretion IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
MF GO:0015204 urea transmembrane transporter activity IEP Enrichment
CC GO:0015627 type II protein secretion system complex IEP Enrichment
BP GO:0015628 protein secretion by the type II secretion system IEP Enrichment
BP GO:0015840 urea transport IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Enrichment
BP GO:0019755 one-carbon compound transport IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
MF GO:0030976 thiamine pyrophosphate binding IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
BP GO:0032940 secretion by cell IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
BP GO:0035592 establishment of protein localization to extracellular region IEP Enrichment
BP GO:0042886 amide transport IEP Enrichment
MF GO:0042887 amide transmembrane transporter activity IEP Enrichment
BP GO:0043413 macromolecule glycosylation IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046903 secretion IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:0071692 protein localization to extracellular region IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
BP GO:0071806 protein transmembrane transport IEP Enrichment
BP GO:0071918 urea transmembrane transport IEP Enrichment
BP GO:0098776 protein transport across the cell outer membrane IEP Enrichment
BP GO:0140352 export from cell IEP Enrichment
MF GO:1901681 sulfur compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR018076 T2SS_GspF_dom 273 395
IPR018076 T2SS_GspF_dom 71 193
Locus_tag PAERUG_E11_London_26_VIM_2_06_13_01101