CRN95504 (gspD)

Aliases : gspD

Description : Putative general secretion pathway protein D [Ensembl]. Bacterial type II and III secretion system protein, Bacterial type II/III secretion system short domain [Interproscan].

Gene families : OG_02_0001314 (OrthoFinder) Phylogenetic Tree(s): OG0001314_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: CRN95504
Cluster	HCCA: Cluster_33

Target	Alias	Description	ECC score	Gene Family Method	Actions
AGT25879	N559_4259	general secretion pathway protein D [Ensembl]. Bacterial...	0.05	OrthoFinder

Type	GO Term	Name	Evidence	Source
BP	GO:0006810	transport	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009306	protein secretion	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0032940	secretion by cell	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0035592	establishment of protein localization to extracellular region	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046903	secretion	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0071692	protein localization to extracellular region	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0140352	export from cell	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	IEP	Enrichment
MF	GO:0003885	D-arabinono-1,4-lactone oxidase activity	IEP	Enrichment
MF	GO:0004620	phospholipase activity	IEP	Enrichment
MF	GO:0004629	phospholipase C activity	IEP	Enrichment
MF	GO:0005215	transporter activity	IEP	Enrichment
CC	GO:0005575	cellular_component	IEP	Enrichment
MF	GO:0008198	ferrous iron binding	IEP	Enrichment
MF	GO:0008483	transaminase activity	IEP	Enrichment
CC	GO:0016020	membrane	IEP	Enrichment
CC	GO:0016021	integral component of membrane	IEP	Enrichment
MF	GO:0016298	lipase activity	IEP	Enrichment
MF	GO:0016769	transferase activity, transferring nitrogenous groups	IEP	Enrichment
MF	GO:0016899	oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor	IEP	Enrichment
CC	GO:0019867	outer membrane	IEP	Enrichment
MF	GO:0022857	transmembrane transporter activity	IEP	Enrichment
CC	GO:0031224	intrinsic component of membrane	IEP	Enrichment
BP	GO:0055085	transmembrane transport	IEP	Enrichment
CC	GO:0110165	cellular anatomical entity	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR004846	T2SS/T3SS	566	732
IPR005644	NolW-like	339	482
IPR005644	NolW-like	199	259
IPR005644	NolW-like	263	332

External Links

Locus_tag	PAERUG_E11_London_26_VIM_2_06_13_01103

CRN95504 (gspD)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation