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CRO53273 (lptB_1)


Aliases : lptB_1

Description : Lipopolysaccharide export system ATP-binding protein LptB [Ensembl]. ABC transporter, Branched-chain amino acid ATP-binding cassette transporter [Interproscan].


Gene families : OG_02_0001299 (OrthoFinder) Phylogenetic Tree(s): OG0001299_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CRO53273
Cluster HCCA: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
AAC76480 livG, b3455 branched-chain amino acid ABC transporter ATPase... 0.03 OrthoFinder
AAK99466 spr0662, livG ABC transporter ATP-binding protein-branched chain amino... 0.04 OrthoFinder
AAL22421 STM3561, livG high-affinity branched-chain amino acid transporter... 0.05 OrthoFinder
AGT22155 N559_0337 leucine/isoleucine/valine transporter ATP-binding... 0.05 OrthoFinder
CRP80448 lptB_3 Lipopolysaccharide export system ATP-binding protein... 0.06 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0006810 transport IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
InterPro domains Description Start Stop
IPR032823 BCA_ABC_TP_C 262 283
IPR003439 ABC_transporter-like_ATP-bd 21 211
Locus_tag PAERUG_E11_London_26_VIM_2_06_13_02703