CRO55515 (rpfC_1)

Aliases : rpfC_1

Description : Sensory/regulatory protein RpfC [Ensembl]. Hpt domain, HAMP domain, Histidine kinase-, Response regulator receiver domain, His Kinase A (phospho-acceptor) domain, Periplasmic sensor domain found in signal transduction proteins [Interproscan].

Gene families : OG_02_0000000 (OrthoFinder) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: CRO55515
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AAC75034 hprS, b1968 putative sensory kinase in two-component regulatory... 0.03 OrthoFinder
AAC75139 baeS, b2078 sensory histidine kinase in two-component regulatory... 0.03 OrthoFinder
AAC77073 basS, b4112 sensory histidine kinase in two-component regulatory... 0.02 OrthoFinder
AAL21669 STM2784, tctE tricarboxylic transport regulatory protein [Ensembl].... 0.02 OrthoFinder
AAL22052 STM3178, ygiY putative sensory histidine kinase in regulatory system... 0.04 OrthoFinder
AAL23115 STM4291, basS sensory kinase in two-component regulatory system with... 0.02 OrthoFinder
AHY40103 CJ8421_04400 sensor histidine kinase [Ensembl]. Histidine kinase-,... 0.03 OrthoFinder
AHY40426 CJ8421_06095 Two-component system histidine kinase DccS [Ensembl].... 0.02 OrthoFinder
AKP15093 kinB, WX61_01035 Alginate biosynthesis sensor protein KinB [Ensembl].... 0.03 OrthoFinder
CCP46064 mtrB, Rv3245c Two component sensory transduction histidine kinase MtrB... 0.02 OrthoFinder
CCP46591 tcrY, Rv3764c Possible two component sensor kinase TcrY [Ensembl].... 0.02 OrthoFinder
CRO64136 bvgS_1 Virulence sensor protein BvgS precursor [Ensembl]. PAS... 0.1 OrthoFinder
CRP17792 bvgS_3 Virulence sensor protein BvgS precursor [Ensembl]. PAS... 0.06 OrthoFinder
CRP23335 rcsC_2 Sensor kinase protein RcsC [Ensembl]. Histidine kinase-,... 0.01 OrthoFinder
KNA61031 VCV51_032006 hsp90-like protein [Ensembl]. Histidine kinase-, His... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEA Interproscan
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
BP GO:0007165 signal transduction IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000030 mannosyltransferase activity IEP Enrichment
MF GO:0000287 magnesium ion binding IEP Enrichment
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
BP GO:0006486 protein glycosylation IEP Enrichment
BP GO:0006493 protein O-linked glycosylation IEP Enrichment
BP GO:0006810 transport IEP Enrichment
MF GO:0010181 FMN binding IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
MF GO:0030976 thiamine pyrophosphate binding IEP Enrichment
BP GO:0043413 macromolecule glycosylation IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:1901681 sulfur compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR008207 Sig_transdc_His_kin_Hpt_dom 614 672
IPR033414 Sensor_dom 3 102
IPR003660 HAMP_dom 131 182
IPR001789 Sig_transdc_resp-reg_receiver 465 578
IPR003594 HATPase_C 332 445
IPR003661 HisK_dim/P 219 283