CRO55563 (arcA_1)

Aliases : arcA_1

Description : Dye resistance protein [Ensembl]. Response regulator receiver domain, Transcriptional regulatory protein [Interproscan].

Gene families : OG_02_0000001 (OrthoFinder) Phylogenetic Tree(s): OG0000001_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: CRO55563
Cluster	HCCA: Cluster_9

Target	Alias	Description	ECC score	Gene Family Method
AAC74680	rstA, b1608	response regulator of RstAB two-component system...	0.04	OrthoFinder
AAC75035	hprR, b1969	response regulator family protein [Ensembl]....	0.04	OrthoFinder
AAC76061	qseB, b3025	quorum sensing DNA-binding response regulator in...	0.06	OrthoFinder
AAC77074	basR, b4113	response regulator in two-component regulatory system...	0.04	OrthoFinder
AAL19351	STM0397, phoB	response regulator in two-component regulatory system...	0.03	OrthoFinder
AAL20028	STM1096, copR	Copper resistance transcriptional regulatory protein...	0.04	OrthoFinder
AAL22051	STM3177, ygiX	putative transcriptional regulator [Ensembl]. Response...	0.04	OrthoFinder
AAL22364	STM3502, ompR	response regulator in two-component regulatory system...	0.03	OrthoFinder
AAL23116	STM4292, basR	response regulator in two-component regulatory system...	0.03	OrthoFinder
AEA93716	OG1RF_11029	response regulator [Ensembl]. Response regulator...	0.03	OrthoFinder
AEA94850	vanR, OG1RF_12163	response regulator [Ensembl]. Response regulator...	0.02	OrthoFinder
AEA95222	OG1RF_12535	response regulator [Ensembl]. Response regulator...	0.02	OrthoFinder
AGT22533	N559_0740, QseB	DNA-binding transcriptional regulator QseB [Ensembl]....	0.03	OrthoFinder
AGT24481	N559_2808, RstA	DNA-binding transcriptional regulator RstA [Ensembl]....	0.02	OrthoFinder
AGT25177	N559_3529, BasR	DNA-binding transcriptional regulator BasR [Ensembl]....	0.03	OrthoFinder
AGT26400	N559_4812	putative response regulator [Ensembl]. Response...	0.02	OrthoFinder
AGT26636	N559_5059, CpxR	DNA-binding transcriptional regulator CpxR [Ensembl]....	0.03	OrthoFinder
AGT26875	N559_5301, CusR	DNA-binding transcriptional activator CusR [Ensembl]....	0.04	OrthoFinder
CCG26924	No alias	Two-component system response regulator [Ensembl]....	0.03	OrthoFinder
CCL16989	BN171_1060003	Two-component response regulator [Ensembl]. Response...	0.03	OrthoFinder
CCL17895	BN171_1930007	Two-component response regulator [Ensembl]. Response...	0.02	OrthoFinder
CCL18125	kdpE, BN171_2100009	Two-component response regulator KdpE [Ensembl]....	0.02	OrthoFinder
CCL18215	BN171_2170002	Two-component response regulator [Ensembl]. Response...	0.02	OrthoFinder
CCL19099	BN171_2870029	Two-component response regulator [Ensembl]. Response...	0.03	OrthoFinder
CCL19656	BN171_3350005	Two-component response regulator [Ensembl]. Response...	0.03	OrthoFinder
CCL20068	BN171_3690012	Two-component response regulator, CheY family [Ensembl]....	0.02	OrthoFinder
CCP43784	trcR, Rv1033c	Two component transcriptional regulator TrcR [Ensembl]....	0.03	OrthoFinder
CPC31435	arlR, ERS093114_00002	Putative response regulator ArlR [Ensembl]....	0.04	OrthoFinder
CPC70217	vicR, ERS093114_01104	Two-component response regulator [Ensembl]....	0.06	OrthoFinder
CRO52494	czcR_1	Transcriptional activator protein CzcR [Ensembl]....	0.07	OrthoFinder
CRP18948	ompR_3	Transcriptional regulatory protein OmpR [Ensembl]....	0.06	OrthoFinder
CRP27775	kdpE	KDP operon transcriptional regulatory protein KdpE...	0.07	OrthoFinder
CRP43486	qseB_3	Transcriptional regulatory protein QseB [Ensembl]....	0.04	OrthoFinder
CRP58313	czcR_4	Transcriptional activator protein CzcR [Ensembl]....	0.05	OrthoFinder
EDJ90310	CGSHi22421_02241	transcriptional regulatory protein [Ensembl]....	0.05	OrthoFinder
EDJ91418	CGSHi22421_04923	response regulator [Ensembl]. Transcriptional regulatory...	0.04	OrthoFinder
KNA52268	VCV51_033433	response regulator receiver domain-containing protein...	0.03	OrthoFinder
KNA54887	VCV51_031804	response regulator receiver domain-containing protein...	0.04	OrthoFinder
KNA55649	VCV51_033016	response regulator receiver domain-containing protein...	0.02	OrthoFinder
KNA58243	VCV51_032751	response regulator receiver domain-containing protein...	0.02	OrthoFinder
KNA60550	VCV51_032221	response regulator receiver domain-containing protein...	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Enrichment
MF	GO:0043565	sequence-specific DNA binding	IEP	Enrichment
MF	GO:0140110	transcription regulator activity	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR001867	OmpR/PhoB-type_DNA-bd	162	237
IPR001789	Sig_transdc_resp-reg_receiver	7	120

External Links

Locus_tag	PAERUG_E11_London_26_VIM_2_06_13_02780

CRO55563 (arcA_1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation