Aliases : dmlR_16
Description : D-malate degradation protein R [Ensembl]. LysR substrate binding domain, Bacterial regulatory helix-turn-helix protein [Interproscan].
Gene families : OG_02_0000007 (OrthoFinder) Phylogenetic Tree(s): OG0000007_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: CRO60046 | |
Cluster | HCCA: Cluster_17 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AGT24140 | N559_2447 | LysR family transcriptional regulator [Ensembl]. LysR... | 0.03 | OrthoFinder | |
AGT24866 | N559_3206 | LysR substrate binding domain protein [Ensembl]. LysR... | 0.03 | OrthoFinder | |
CRO76276 | dmlR_20 | D-malate degradation protein R [Ensembl]. LysR substrate... | 0.08 | OrthoFinder | |
CRP22590 | dmlR_24 | D-malate degradation protein R [Ensembl]. LysR substrate... | 0.03 | OrthoFinder | |
CRP22917 | dmlR_25 | D-malate degradation protein R [Ensembl]. LysR substrate... | 0.02 | OrthoFinder | |
CRP68785 | dmlR_33 | D-malate degradation protein R [Ensembl]. LysR substrate... | 0.02 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003700 | DNA-binding transcription factor activity | IEA | Interproscan |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000287 | magnesium ion binding | IEP | Enrichment |
MF | GO:0003824 | catalytic activity | IEP | Enrichment |
MF | GO:0008410 | CoA-transferase activity | IEP | Enrichment |
MF | GO:0016491 | oxidoreductase activity | IEP | Enrichment |
MF | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | IEP | Enrichment |
MF | GO:0016782 | transferase activity, transferring sulphur-containing groups | IEP | Enrichment |
MF | GO:0030976 | thiamine pyrophosphate binding | IEP | Enrichment |
MF | GO:0036094 | small molecule binding | IEP | Enrichment |
MF | GO:0043167 | ion binding | IEP | Enrichment |
MF | GO:0043168 | anion binding | IEP | Enrichment |
MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | Enrichment |
BP | GO:0055114 | obsolete oxidation-reduction process | IEP | Enrichment |
MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
MF | GO:1901681 | sulfur compound binding | IEP | Enrichment |
Locus_tag | PAERUG_E11_London_26_VIM_2_06_13_02894 |