- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : TRAP-type C4-dicarboxylate transport system, small permease component [Ensembl]. Tripartite ATP-independent periplasmic transporters [Interproscan].
Gene families : OG_02_0001377 (OrthoFinder) Phylogenetic Tree(s): OG0001377_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: CRO72330 | |
| Cluster | HCCA: Cluster_33 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004764 | shikimate 3-dehydrogenase (NADP+) activity | IEP | Enrichment |
| MF | GO:0005215 | transporter activity | IEP | Enrichment |
| CC | GO:0005575 | cellular_component | IEP | Enrichment |
| BP | GO:0006810 | transport | IEP | Enrichment |
| BP | GO:0009306 | protein secretion | IEP | Enrichment |
| CC | GO:0016020 | membrane | IEP | Enrichment |
| MF | GO:0016491 | oxidoreductase activity | IEP | Enrichment |
| MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | Enrichment |
| MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | Enrichment |
| CC | GO:0019867 | outer membrane | IEP | Enrichment |
| MF | GO:0022857 | transmembrane transporter activity | IEP | Enrichment |
| BP | GO:0032940 | secretion by cell | IEP | Enrichment |
| BP | GO:0035592 | establishment of protein localization to extracellular region | IEP | Enrichment |
| BP | GO:0046903 | secretion | IEP | Enrichment |
| BP | GO:0051179 | localization | IEP | Enrichment |
| BP | GO:0051234 | establishment of localization | IEP | Enrichment |
| BP | GO:0055085 | transmembrane transport | IEP | Enrichment |
| BP | GO:0055114 | obsolete oxidation-reduction process | IEP | Enrichment |
| BP | GO:0071692 | protein localization to extracellular region | IEP | Enrichment |
| CC | GO:0110165 | cellular anatomical entity | IEP | Enrichment |
| BP | GO:0140352 | export from cell | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR007387 | TRAP_DctQ | 25 | 145 |
| Locus_tag | PAERUG_E11_London_26_VIM_2_06_13_03259 |