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  5. AEA92862

AEA92862 (rpsM, OG1RF_10175)


Aliases : rpsM, OG1RF_10175

Description : 30S ribosomal protein S13 [Ensembl]. Ribosomal protein S13/S18 [Interproscan].


Gene families : OG_02_0000825 (OrthoFinder) Phylogenetic Tree(s): OG0000825_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AEA92862
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AAK99017 spr0213, rpsM 30S Ribosomal protein S13 [Ensembl]. Ribosomal protein... 0.14 OrthoFinder
ADK86745 rpsM, MPNE_0218 30S ribosomal protein S13 [Ensembl]. Ribosomal protein... 0.04 OrthoFinder
AHY40765 rpsM, CJ8421_07965 30S ribosomal protein S13 [Ensembl]. Ribosomal protein... 0.22 OrthoFinder
AKI50543 rpsM, L2625_02753 ribosomal protein S13 [Ensembl]. Ribosomal protein S13... 0.27 OrthoFinder
AKP15144 rpsM, WX61_01090 30S ribosomal protein S13 [Ensembl]. Ribosomal protein... 0.09 OrthoFinder
CBI65740 rpsM, HPB8_183 small subunit ribosomal protein S13 [Ensembl]. Ribosomal... 0.15 OrthoFinder
CCG27403 No alias SSU ribosomal protein S13p (S18e) [Ensembl]. Ribosomal... 0.08 OrthoFinder
CCL20588 rpsM, BN171_70028 30S ribosomal protein S13 [Ensembl]. Ribosomal protein... 0.26 OrthoFinder
CCP46282 rpsM, Rv3460c 30S ribosomal protein S13 RpsM [Ensembl]. Ribosomal... 0.24 OrthoFinder
CPD14335 rpsM, ERS093114_02146 30S ribosomal protein S13 [Ensembl]. Ribosomal protein... 0.36 OrthoFinder
CRO74398 rpsM 30S ribosomal protein S13 [Ensembl]. Ribosomal protein... 0.16 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004017 adenylate kinase activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
BP GO:0006304 DNA modification IEP Enrichment
BP GO:0006305 DNA alkylation IEP Enrichment
BP GO:0006306 DNA methylation IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
MF GO:0008170 N-methyltransferase activity IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016776 phosphotransferase activity, phosphate group as acceptor IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0019205 nucleobase-containing compound kinase activity IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
BP GO:0032259 methylation IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0043414 macromolecule methylation IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
BP GO:0044728 DNA methylation or demethylation IEP Enrichment
MF GO:0050145 nucleoside monophosphate kinase activity IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
InterPro domains Description Start Stop
IPR001892 Ribosomal_S13 3 108
No external refs found!