Coexpression cluster: Cluster_7 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0043170 macromolecule metabolic process 21.97% (38/173) 1.64 0.0 0.0
GO:0044260 cellular macromolecule metabolic process 15.61% (27/173) 1.98 0.0 0.0
GO:0034641 cellular nitrogen compound metabolic process 20.23% (35/173) 1.45 0.0 1e-06
GO:0034645 cellular macromolecule biosynthetic process 10.4% (18/173) 2.16 0.0 2e-06
GO:0044237 cellular metabolic process 24.86% (43/173) 1.2 0.0 3e-06
GO:0003735 structural constituent of ribosome 8.09% (14/173) 2.31 0.0 8e-06
GO:0005198 structural molecule activity 8.09% (14/173) 2.31 0.0 8e-06
GO:0044238 primary metabolic process 24.86% (43/173) 1.1 0.0 8e-06
GO:0006807 nitrogen compound metabolic process 22.54% (39/173) 1.21 0.0 8e-06
GO:0043043 peptide biosynthetic process 8.09% (14/173) 2.28 0.0 8e-06
GO:0006518 peptide metabolic process 8.09% (14/173) 2.28 0.0 8e-06
GO:0043604 amide biosynthetic process 8.09% (14/173) 2.28 0.0 8e-06
GO:0044267 cellular protein metabolic process 8.67% (15/173) 2.16 0.0 9e-06
GO:0009059 macromolecule biosynthetic process 10.4% (18/173) 1.98 0.0 9e-06
GO:0006412 translation 8.09% (14/173) 2.35 0.0 9e-06
GO:0043603 cellular amide metabolic process 8.09% (14/173) 2.25 0.0 9e-06
GO:0005840 ribosome 7.51% (13/173) 2.28 1e-06 1.7e-05
GO:0043228 non-membrane-bounded organelle 7.51% (13/173) 2.21 2e-06 2.6e-05
GO:0043226 organelle 7.51% (13/173) 2.21 2e-06 2.6e-05
GO:0043229 intracellular organelle 7.51% (13/173) 2.21 2e-06 2.6e-05
GO:0043232 intracellular non-membrane-bounded organelle 7.51% (13/173) 2.21 2e-06 2.6e-05
GO:0090304 nucleic acid metabolic process 11.56% (20/173) 1.67 2e-06 3.1e-05
GO:0019538 protein metabolic process 9.83% (17/173) 1.84 2e-06 3.2e-05
GO:0008152 metabolic process 28.32% (49/173) 0.88 5e-06 6.8e-05
GO:1901363 heterocyclic compound binding 27.75% (48/173) 0.89 5e-06 7.1e-05
GO:0097159 organic cyclic compound binding 27.75% (48/173) 0.89 5e-06 7.1e-05
GO:0071704 organic substance metabolic process 25.43% (44/173) 0.9 1.3e-05 0.000158
GO:0044249 cellular biosynthetic process 12.72% (22/173) 1.4 1.4e-05 0.000166
GO:0009058 biosynthetic process 14.45% (25/173) 1.29 1.4e-05 0.000172
GO:1901576 organic substance biosynthetic process 12.72% (22/173) 1.38 1.9e-05 0.00021
GO:0044271 cellular nitrogen compound biosynthetic process 9.83% (17/173) 1.58 2.9e-05 0.00032
GO:0003723 RNA binding 6.94% (12/173) 1.81 9e-05 0.000944
GO:1901566 organonitrogen compound biosynthetic process 8.67% (15/173) 1.52 0.000142 0.001453
GO:0009987 cellular process 27.75% (48/173) 0.69 0.000247 0.002449
GO:0006259 DNA metabolic process 5.2% (9/173) 1.98 0.000271 0.002613
GO:0006139 nucleobase-containing compound metabolic process 12.14% (21/173) 1.16 0.00029 0.002711
GO:0043412 macromolecule modification 4.05% (7/173) 2.25 0.00039 0.003554
GO:0005488 binding 27.75% (48/173) 0.64 0.000529 0.004695
GO:0006310 DNA recombination 2.31% (4/173) 3.09 0.000584 0.005044
GO:0035639 purine ribonucleoside triphosphate binding 14.45% (25/173) 0.96 0.000661 0.005436
GO:0032555 purine ribonucleotide binding 14.45% (25/173) 0.96 0.000661 0.005436
GO:0009451 RNA modification 2.89% (5/173) 2.63 0.00069 0.005535
GO:0017076 purine nucleotide binding 14.45% (25/173) 0.96 0.000716 0.005614
GO:0043168 anion binding 16.18% (28/173) 0.89 0.000761 0.005832
GO:0006725 cellular aromatic compound metabolic process 12.14% (21/173) 1.05 0.000829 0.006071
GO:0046483 heterocycle metabolic process 12.14% (21/173) 1.05 0.000829 0.006071
GO:0005525 GTP binding 3.47% (6/173) 2.23 0.001087 0.007183
GO:0032561 guanyl ribonucleotide binding 3.47% (6/173) 2.23 0.001087 0.007183
GO:0019001 guanyl nucleotide binding 3.47% (6/173) 2.23 0.001087 0.007183
GO:0032553 ribonucleotide binding 14.45% (25/173) 0.92 0.001055 0.007566
GO:1901360 organic cyclic compound metabolic process 12.14% (21/173) 1.02 0.001078 0.007572
GO:0003676 nucleic acid binding 13.87% (24/173) 0.92 0.001327 0.008603
GO:0000166 nucleotide binding 15.03% (26/173) 0.86 0.0015 0.008715
GO:1901265 nucleoside phosphate binding 15.03% (26/173) 0.86 0.0015 0.008715
GO:0006281 DNA repair 3.47% (6/173) 2.16 0.001468 0.008832
GO:0051716 cellular response to stimulus 3.47% (6/173) 2.16 0.001468 0.008832
GO:0006974 cellular response to DNA damage stimulus 3.47% (6/173) 2.16 0.001468 0.008832
GO:0033554 cellular response to stress 3.47% (6/173) 2.16 0.001468 0.008832
GO:0016070 RNA metabolic process 6.36% (11/173) 1.45 0.001709 0.009761
GO:0006950 response to stress 3.47% (6/173) 2.09 0.001942 0.010907
GO:0036094 small molecule binding 16.18% (28/173) 0.79 0.002107 0.011639
GO:0097367 carbohydrate derivative binding 14.45% (25/173) 0.83 0.002655 0.014431
GO:0009378 four-way junction helicase activity 1.16% (2/173) 3.9 0.004475 0.022852
GO:0003743 translation initiation factor activity 1.16% (2/173) 3.9 0.004475 0.022852
GO:0006413 translational initiation 1.16% (2/173) 3.9 0.004475 0.022852
GO:0003674 molecular_function 48.55% (84/173) 0.32 0.004288 0.022938
GO:1901564 organonitrogen compound metabolic process 11.56% (20/173) 0.85 0.005869 0.029518
GO:0043167 ion binding 16.18% (28/173) 0.69 0.006069 0.030076
GO:0050896 response to stimulus 3.47% (6/173) 1.78 0.00622 0.03038
GO:0006396 RNA processing 2.89% (5/173) 1.9 0.008693 0.041849
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Campylobacter jejuni HCCA Cluster_1 0.03 OrthoFinder Compare
Campylobacter jejuni HCCA Cluster_2 0.038 OrthoFinder Compare
Campylobacter jejuni HCCA Cluster_8 0.09 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_2 0.111 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_8 0.028 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_12 0.028 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_28 0.039 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_30 0.049 OrthoFinder Compare
Enterococcus faecalis HCCA Cluster_21 0.033 OrthoFinder Compare
Escherichia coli HCCA Cluster_1 0.083 OrthoFinder Compare
Escherichia coli HCCA Cluster_29 0.034 OrthoFinder Compare
Escherichia coli HCCA Cluster_47 0.033 OrthoFinder Compare
Haemophilus influenzae HCCA Cluster_8 0.034 OrthoFinder Compare
Haemophilus influenzae HCCA Cluster_17 0.069 OrthoFinder Compare
Haemophilus influenzae HCCA Cluster_22 0.033 OrthoFinder Compare
Helicobacter pylori HCCA Cluster_8 0.027 OrthoFinder Compare
Helicobacter pylori HCCA Cluster_9 0.08 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_12 0.049 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_26 0.038 OrthoFinder Compare
Listeria monocytogenes HCCA Cluster_2 0.079 OrthoFinder Compare
Listeria monocytogenes HCCA Cluster_18 0.058 OrthoFinder Compare
Listeria monocytogenes HCCA Cluster_20 0.044 OrthoFinder Compare
Listeria monocytogenes HCCA Cluster_24 0.092 OrthoFinder Compare
Listeria monocytogenes HCCA Cluster_26 0.041 OrthoFinder Compare
Mycoplasma pneumoniae HCAA Cluster_3 0.027 OrthoFinder Compare
Mycoplasma pneumoniae HCAA Cluster_5 0.082 OrthoFinder Compare
Mycobacterium tuberculosis HCCA Cluster_25 0.047 OrthoFinder Compare
Neisseria gonorrhoeae HCCA Cluster_5 0.04 OrthoFinder Compare
Neisseria gonorrhoeae HCCA Cluster_6 0.045 OrthoFinder Compare
Neisseria gonorrhoeae HCCA Cluster_7 0.032 OrthoFinder Compare
Neisseria gonorrhoeae HCCA Cluster_12 0.046 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_22 0.05 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_40 0.044 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_62 0.032 OrthoFinder Compare
Salmonella enterica HCCA Cluster_3 0.032 OrthoFinder Compare
Salmonella enterica HCCA Cluster_23 0.089 OrthoFinder Compare
Salmonella enterica HCCA Cluster_31 0.029 OrthoFinder Compare
Salmonella enterica HCCA Cluster_32 0.037 OrthoFinder Compare
Staphylococcus aureus HCCA Cluster_4 0.034 OrthoFinder Compare
Staphylococcus aureus HCCA Cluster_5 0.064 OrthoFinder Compare
Staphylococcus aureus HCCA Cluster_9 0.027 OrthoFinder Compare
Staphylococcus aureus HCCA Cluster_10 0.029 OrthoFinder Compare
Staphylococcus aureus HCCA Cluster_19 0.045 OrthoFinder Compare
Staphylococcus aureus HCCA Cluster_24 0.087 OrthoFinder Compare
Streptococcus pneumoniae HCCA Cluster_2 0.045 OrthoFinder Compare
Streptococcus pneumoniae HCCA Cluster_7 0.063 OrthoFinder Compare
Streptococcus pneumoniae HCCA Cluster_13 0.077 OrthoFinder Compare
Streptococcus pneumoniae HCCA Cluster_14 0.035 OrthoFinder Compare
Streptococcus pneumoniae HCCA Cluster_18 0.065 OrthoFinder Compare
Streptococcus pyogenes HCAA Cluster_4 0.063 OrthoFinder Compare
Streptococcus pyogenes HCAA Cluster_7 0.054 OrthoFinder Compare
Streptococcus pyogenes HCAA Cluster_9 0.074 OrthoFinder Compare
Streptococcus pyogenes HCAA Cluster_11 0.071 OrthoFinder Compare
Streptococcus pyogenes HCAA Cluster_18 0.037 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_8 0.088 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_24 0.039 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_25 0.031 OrthoFinder Compare
Sequences (173) (download table)

InterPro Domains

GO Terms

Family Terms