CRO80200 (cynR_3)


Aliases : cynR_3

Description : Cyn operon transcriptional activator [Ensembl]. LysR substrate binding domain, Bacterial regulatory helix-turn-helix protein [Interproscan].


Gene families : OG_02_0000002 (OrthoFinder) Phylogenetic Tree(s): OG0000002_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CRO80200
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
AAC75458 xapR, b2405 transcriptional activator of xapAB [Ensembl]. LysR... 0.03 OrthoFinder
AAL20406 STM1487, ynfL putative LysR family transcriptional regulator... 0.05 OrthoFinder
AAL21318 STM2424, yfeR putative LysR family transcriptional regulator... 0.04 OrthoFinder
AEA94055 OG1RF_11368 LysR family transcriptional regulator [Ensembl]. LysR... 0.02 OrthoFinder
AGT23181 N559_1423 LysR family transcriptional regulator [Ensembl]. LysR... 0.03 OrthoFinder
AGT23255 N559_1502 putative LysR-family transcriptional regulator... 0.03 OrthoFinder
AGT23273 N559_1520, CynR DNA-binding transcriptional regulator CynR [Ensembl].... 0.02 OrthoFinder
AGT23946 N559_2239 LysR family transcriptional regulator [Ensembl]. LysR... 0.03 OrthoFinder
AGT24668 N559_3005, CysB transcriptional regulator CysB [Ensembl]. LysR substrate... 0.04 OrthoFinder
AGT24793 N559_3132 LysR family transcriptional regulator [Ensembl]. LysR... 0.02 OrthoFinder
AGT26606 N559_5029, OxyR DNA-binding transcriptional regulator OxyR [Ensembl].... 0.04 OrthoFinder
AKI48437 L2625_00496 transcriptional regulator, LysR family [Ensembl].... 0.02 OrthoFinder
AKI49729 gltC, L2625_01870 transcriptional activator of the glutamate synthase... 0.02 OrthoFinder
AKI50144 L2625_02308 transcriptional regulator, LysR family [Ensembl]. LysR,... 0.02 OrthoFinder
CCL19137 BN171_2880004 Transcriptional regulator, LysR family [Ensembl]. LysR... 0.04 OrthoFinder
CCP45064 Rv2282c Probable transcription regulator (LysR family)... 0.02 OrthoFinder
CRN70888 gltC_1 HTH-type transcriptional regulator GltC [Ensembl]. LysR... 0.06 OrthoFinder
CRO37348 benM_3 Ben and cat operon transcriptional regulator [Ensembl].... 0.08 OrthoFinder
CRO43121 cmpR_1 HTH-type transcriptional activator CmpR [Ensembl]. LysR... 0.04 OrthoFinder
CRP00540 cysL_3 CysJI operon transcriptional activator [Ensembl]. LysR... 0.08 OrthoFinder
CRP01952 cmpR_2 HTH-type transcriptional activator CmpR [Ensembl]. LysR... 0.07 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Enrichment
BP GO:0006810 transport IEP Enrichment
MF GO:0010181 FMN binding IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
BP GO:0030001 metal ion transport IEP Enrichment
MF GO:0046873 metal ion transmembrane transporter activity IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR005119 LysR_subst-bd 94 300
IPR000847 Tscrpt_reg_HTH_LysR 12 68