Aliases : cynR_3
Description : Cyn operon transcriptional activator [Ensembl]. LysR substrate binding domain, Bacterial regulatory helix-turn-helix protein [Interproscan].
Gene families : OG_02_0000002 (OrthoFinder) Phylogenetic Tree(s): OG0000002_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: CRO80200 | |
Cluster | HCCA: Cluster_15 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AAC75458 | xapR, b2405 | transcriptional activator of xapAB [Ensembl]. LysR... | 0.03 | OrthoFinder | |
AAL20406 | STM1487, ynfL | putative LysR family transcriptional regulator... | 0.05 | OrthoFinder | |
AAL21318 | STM2424, yfeR | putative LysR family transcriptional regulator... | 0.04 | OrthoFinder | |
AEA94055 | OG1RF_11368 | LysR family transcriptional regulator [Ensembl]. LysR... | 0.02 | OrthoFinder | |
AGT23181 | N559_1423 | LysR family transcriptional regulator [Ensembl]. LysR... | 0.03 | OrthoFinder | |
AGT23255 | N559_1502 | putative LysR-family transcriptional regulator... | 0.03 | OrthoFinder | |
AGT23273 | N559_1520, CynR | DNA-binding transcriptional regulator CynR [Ensembl].... | 0.02 | OrthoFinder | |
AGT23946 | N559_2239 | LysR family transcriptional regulator [Ensembl]. LysR... | 0.03 | OrthoFinder | |
AGT24668 | N559_3005, CysB | transcriptional regulator CysB [Ensembl]. LysR substrate... | 0.04 | OrthoFinder | |
AGT24793 | N559_3132 | LysR family transcriptional regulator [Ensembl]. LysR... | 0.02 | OrthoFinder | |
AGT26606 | N559_5029, OxyR | DNA-binding transcriptional regulator OxyR [Ensembl].... | 0.04 | OrthoFinder | |
AKI48437 | L2625_00496 | transcriptional regulator, LysR family [Ensembl].... | 0.02 | OrthoFinder | |
AKI49729 | gltC, L2625_01870 | transcriptional activator of the glutamate synthase... | 0.02 | OrthoFinder | |
AKI50144 | L2625_02308 | transcriptional regulator, LysR family [Ensembl]. LysR,... | 0.02 | OrthoFinder | |
CCL19137 | BN171_2880004 | Transcriptional regulator, LysR family [Ensembl]. LysR... | 0.04 | OrthoFinder | |
CCP45064 | Rv2282c | Probable transcription regulator (LysR family)... | 0.02 | OrthoFinder | |
CRN70888 | gltC_1 | HTH-type transcriptional regulator GltC [Ensembl]. LysR... | 0.06 | OrthoFinder | |
CRO37348 | benM_3 | Ben and cat operon transcriptional regulator [Ensembl].... | 0.08 | OrthoFinder | |
CRO43121 | cmpR_1 | HTH-type transcriptional activator CmpR [Ensembl]. LysR... | 0.04 | OrthoFinder | |
CRP00540 | cysL_3 | CysJI operon transcriptional activator [Ensembl]. LysR... | 0.08 | OrthoFinder | |
CRP01952 | cmpR_2 | HTH-type transcriptional activator CmpR [Ensembl]. LysR... | 0.07 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003700 | DNA-binding transcription factor activity | IEA | Interproscan |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005215 | transporter activity | IEP | Enrichment |
BP | GO:0006810 | transport | IEP | Enrichment |
MF | GO:0010181 | FMN binding | IEP | Enrichment |
MF | GO:0022857 | transmembrane transporter activity | IEP | Enrichment |
BP | GO:0030001 | metal ion transport | IEP | Enrichment |
MF | GO:0046873 | metal ion transmembrane transporter activity | IEP | Enrichment |
BP | GO:0051179 | localization | IEP | Enrichment |
BP | GO:0051234 | establishment of localization | IEP | Enrichment |
BP | GO:0055085 | transmembrane transport | IEP | Enrichment |
Locus_tag | PAERUG_E11_London_26_VIM_2_06_13_03484 |