Coexpression cluster: Cluster_15 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0016020 membrane 19.61% (20/102) 1.89 0.0 5e-05
GO:0110165 cellular anatomical entity 27.45% (28/102) 1.42 1e-06 6.9e-05
GO:0005575 cellular_component 27.45% (28/102) 1.33 3e-06 0.000157
GO:0140110 transcription regulator activity 13.73% (14/102) 1.87 2.4e-05 0.000897
GO:0003700 DNA-binding transcription factor activity 13.73% (14/102) 1.87 2.3e-05 0.001071
GO:0022857 transmembrane transporter activity 13.73% (14/102) 1.63 0.000141 0.002379
GO:0005215 transporter activity 13.73% (14/102) 1.63 0.000141 0.002379
GO:0050794 regulation of cellular process 19.61% (20/102) 1.34 8.9e-05 0.002744
GO:0065007 biological regulation 19.61% (20/102) 1.29 0.000137 0.002812
GO:0050789 regulation of biological process 19.61% (20/102) 1.32 0.000108 0.002846
GO:0008150 biological_process 44.12% (45/102) 0.71 0.000128 0.002962
GO:0051234 establishment of localization 17.65% (18/102) 1.32 0.000234 0.00309
GO:0006810 transport 17.65% (18/102) 1.32 0.000234 0.00309
GO:0051179 localization 17.65% (18/102) 1.32 0.000234 0.00309
GO:0060255 regulation of macromolecule metabolic process 14.71% (15/102) 1.31 0.00088 0.005249
GO:0019222 regulation of metabolic process 14.71% (15/102) 1.31 0.00088 0.005249
GO:0080090 regulation of primary metabolic process 14.71% (15/102) 1.32 0.000856 0.005463
GO:0010468 regulation of gene expression 14.71% (15/102) 1.32 0.000834 0.005508
GO:0031323 regulation of cellular metabolic process 14.71% (15/102) 1.33 0.000811 0.00556
GO:0051171 regulation of nitrogen compound metabolic process 14.71% (15/102) 1.33 0.000811 0.00556
GO:0010556 regulation of macromolecule biosynthetic process 14.71% (15/102) 1.33 0.00079 0.005844
GO:0009889 regulation of biosynthetic process 14.71% (15/102) 1.33 0.00079 0.005844
GO:0031326 regulation of cellular biosynthetic process 14.71% (15/102) 1.33 0.00079 0.005844
GO:0016021 integral component of membrane 11.76% (12/102) 1.61 0.000509 0.005891
GO:0031224 intrinsic component of membrane 11.76% (12/102) 1.61 0.000509 0.005891
GO:2000112 regulation of cellular macromolecule biosynthetic process 14.71% (15/102) 1.33 0.000769 0.006463
GO:0019219 regulation of nucleobase-containing compound metabolic process 14.71% (15/102) 1.33 0.000769 0.006463
GO:2001141 regulation of RNA biosynthetic process 14.71% (15/102) 1.34 0.000748 0.006918
GO:0051252 regulation of RNA metabolic process 14.71% (15/102) 1.34 0.000748 0.006918
GO:1903506 regulation of nucleic acid-templated transcription 14.71% (15/102) 1.34 0.000728 0.007479
GO:0006355 regulation of transcription, DNA-templated 14.71% (15/102) 1.34 0.000728 0.007479
GO:0043565 sequence-specific DNA binding 5.88% (6/102) 2.28 0.001406 0.008128
GO:0055085 transmembrane transport 12.75% (13/102) 1.28 0.002471 0.01385
GO:0010181 FMN binding 2.94% (3/102) 3.33 0.003013 0.016393
GO:0016773 phosphotransferase activity, alcohol group as acceptor 4.9% (5/102) 2.03 0.007307 0.038624
GO:0140299 small molecule sensor activity 3.92% (4/102) 2.3 0.008638 0.040974
GO:0016775 phosphotransferase activity, nitrogenous group as acceptor 3.92% (4/102) 2.3 0.008638 0.040974
GO:0004673 protein histidine kinase activity 3.92% (4/102) 2.3 0.008638 0.040974
GO:0000155 phosphorelay sensor kinase activity 3.92% (4/102) 2.3 0.008638 0.040974
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Clostridioides difficile HCCA Cluster_1 0.027 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_29 0.03 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_37 0.034 OrthoFinder Compare
Escherichia coli HCCA Cluster_3 0.044 OrthoFinder Compare
Escherichia coli HCCA Cluster_10 0.03 OrthoFinder Compare
Escherichia coli HCCA Cluster_17 0.036 OrthoFinder Compare
Escherichia coli HCCA Cluster_28 0.032 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_5 0.03 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_24 0.029 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_31 0.036 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_42 0.039 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_45 0.037 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_46 0.029 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_51 0.028 OrthoFinder Compare
Listeria monocytogenes HCCA Cluster_26 0.029 OrthoFinder Compare
Neisseria gonorrhoeae HCCA Cluster_11 0.03 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_5 0.038 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_9 0.037 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_11 0.059 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_18 0.028 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_19 0.038 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_21 0.034 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_32 0.029 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_33 0.059 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_37 0.027 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_48 0.028 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_50 0.033 OrthoFinder Compare
Salmonella enterica HCCA Cluster_13 0.03 OrthoFinder Compare
Salmonella enterica HCCA Cluster_35 0.028 OrthoFinder Compare
Salmonella enterica HCCA Cluster_36 0.038 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_6 0.03 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_15 0.05 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_22 0.029 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_28 0.042 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_29 0.041 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_32 0.03 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_33 0.04 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_35 0.029 OrthoFinder Compare
Sequences (102) (download table)

InterPro Domains

GO Terms

Family Terms