1. Home
  2. Species
  3. Pseudomonas aeruginosa
  4. Sequence
  5. CRO91820

CRO91820 (lolE_1)


Aliases : lolE_1

Description : Lipoprotein-releasing system transmembrane protein LolE [Ensembl]. FtsX-like permease family, MacB-like periplasmic core domain [Interproscan].


Gene families : OG_02_0000459 (OrthoFinder) Phylogenetic Tree(s): OG0000459_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CRO91820
Cluster HCCA: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
AAC74202 lolE, b1118 lipoprotein-releasing system transmembrane protein... 0.03 OrthoFinder
AAL20146 STM1217, ycfU integral membrane protein ABC transporter [Ensembl].... 0.05 OrthoFinder
AAL20148 STM1219, ycfW integral membrane protein ABC transporter [Ensembl].... 0.05 OrthoFinder
AGT24834 N559_3174, LolC outer membrane-specific lipoprotein transporter subunit... 0.07 OrthoFinder
AHY40154 CJ8421_04655 putative permease [Ensembl]. FtsX-like permease family... 0.04 OrthoFinder
AKP16175 lolE, WX61_02151 Lipoprotein-releasing system transmembrane protein LolE... 0.02 OrthoFinder
CBI66552 HPB8_995 conserved hypothetical protein [Ensembl]. FtsX-like... 0.03 OrthoFinder
EDJ90129 CGSHi22421_03378 ABC-type transport system, involved in lipoprotein... 0.03 OrthoFinder
EDJ90137 CGSHi22421_03418 adenosylmethionine--8-amino-7-oxononanoate transaminase... 0.03 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003678 DNA helicase activity IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003848 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity IEP Enrichment
MF GO:0004399 histidinol dehydrogenase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
MF GO:0008144 drug binding IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008173 RNA methyltransferase activity IEP Enrichment
BP GO:0008360 regulation of cell shape IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
BP GO:0008616 queuosine biosynthetic process IEP Enrichment
MF GO:0008658 penicillin binding IEP Enrichment
BP GO:0009119 ribonucleoside metabolic process IEP Enrichment
BP GO:0009163 nucleoside biosynthetic process IEP Enrichment
MF GO:0009378 four-way junction helicase activity IEP Enrichment
BP GO:0009396 folic acid-containing compound biosynthetic process IEP Enrichment
BP GO:0009403 toxin biosynthetic process IEP Enrichment
BP GO:0009404 toxin metabolic process IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016778 diphosphotransferase activity IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Enrichment
BP GO:0019748 secondary metabolic process IEP Enrichment
BP GO:0022603 regulation of anatomical structure morphogenesis IEP Enrichment
BP GO:0022604 regulation of cell morphogenesis IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
MF GO:0031406 carboxylic acid binding IEP Enrichment
MF GO:0033218 amide binding IEP Enrichment
MF GO:0033293 monocarboxylic acid binding IEP Enrichment
BP GO:0034404 nucleobase-containing small molecule biosynthetic process IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0042455 ribonucleoside biosynthetic process IEP Enrichment
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
MF GO:0043177 organic acid binding IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044550 secondary metabolite biosynthetic process IEP Enrichment
BP GO:0046116 queuosine metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0050793 regulation of developmental process IEP Enrichment
BP GO:0065008 regulation of biological quality IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901659 glycosyl compound biosynthetic process IEP Enrichment
MF GO:1901681 sulfur compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR025857 MacB_PCD 27 235
IPR003838 ABC3_permease_dom 301 409
Locus_tag PAERUG_E11_London_26_VIM_2_06_13_03837