Aliases : celB, OG1RF_10235
Description : PTS family lactose-N,N'-diacetylchitobiose-beta-glucoside (lac) porter component IIBC [Ensembl]. Phosphotransferase system [Interproscan].
Gene families : OG_02_0000049 (OrthoFinder) Phylogenetic Tree(s): OG0000049_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AEA92922 | |
Cluster | HCCA: Cluster_26 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AGT22773 | N559_0987 | putative PTS family enzyme IIC component [Ensembl]. | 0.03 | OrthoFinder | |
AGT24712 | N559_3049 | PTS system N,N'-diacetylchitobiose-specific transporter... | 0.03 | OrthoFinder | |
AGT26240 | N559_4646 | putative phosphotransferase protein [Ensembl]. | 0.03 | OrthoFinder | |
AKI48269 | L2625_00322 | PTS system, IIC component [Ensembl]. Phosphotransferase... | 0.03 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008982 | protein-N(PI)-phosphohistidine-sugar phosphotransferase activity | IEA | Interproscan |
BP | GO:0009401 | phosphoenolpyruvate-dependent sugar phosphotransferase system | IEA | Interproscan |
CC | GO:0016020 | membrane | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000272 | polysaccharide catabolic process | IEP | Enrichment |
MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Enrichment |
MF | GO:0004817 | cysteine-tRNA ligase activity | IEP | Enrichment |
BP | GO:0005975 | carbohydrate metabolic process | IEP | Enrichment |
BP | GO:0005976 | polysaccharide metabolic process | IEP | Enrichment |
BP | GO:0006063 | uronic acid metabolic process | IEP | Enrichment |
BP | GO:0006064 | glucuronate catabolic process | IEP | Enrichment |
BP | GO:0006423 | cysteinyl-tRNA aminoacylation | IEP | Enrichment |
MF | GO:0008927 | mannonate dehydratase activity | IEP | Enrichment |
BP | GO:0016054 | organic acid catabolic process | IEP | Enrichment |
MF | GO:0016491 | oxidoreductase activity | IEP | Enrichment |
MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | Enrichment |
MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | Enrichment |
MF | GO:0016787 | hydrolase activity | IEP | Enrichment |
MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Enrichment |
BP | GO:0019585 | glucuronate metabolic process | IEP | Enrichment |
BP | GO:0046395 | carboxylic acid catabolic process | IEP | Enrichment |
BP | GO:0055114 | obsolete oxidation-reduction process | IEP | Enrichment |
BP | GO:0072329 | monocarboxylic acid catabolic process | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR003352 | PTS_EIIC | 26 | 354 |
No external refs found! |