CRO99250

Description : EcoKI restriction-modification system protein HsdS [Ensembl]. Type I restriction modification DNA specificity domain [Interproscan].

Gene families : OG_02_0000928 (OrthoFinder) Phylogenetic Tree(s): OG0000928_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: CRO99250
Cluster	HCCA: Cluster_57

Target	Alias	Description	ECC score	Gene Family Method	Actions
AAK99252	spr0448, hsdS	Type I site-specific deoxyribonuclease chain S...	0.03	OrthoFinder
AHY40725	CJ8421_07755	Type I restriction-modification system, specificity...	0.04	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006304	DNA modification	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000150	DNA strand exchange activity	IEP	Enrichment
BP	GO:0006305	DNA alkylation	IEP	Enrichment
BP	GO:0006306	DNA methylation	IEP	Enrichment
BP	GO:0006310	DNA recombination	IEP	Enrichment
MF	GO:0008170	N-methyltransferase activity	IEP	Enrichment
MF	GO:0016805	dipeptidase activity	IEP	Enrichment
BP	GO:0043414	macromolecule methylation	IEP	Enrichment
BP	GO:0044728	DNA methylation or demethylation	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR000055	Restrct_endonuc_typeI_TRD	367	529
IPR000055	Restrct_endonuc_typeI_TRD	142	253

External Links

Locus_tag	PAERUG_E11_London_26_VIM_2_06_13_04059

CRO99250

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation