CRP00666 (lcdH_2)

Aliases : lcdH_2

Description : L-carnitine dehydrogenase [Ensembl]. 3-hydroxyacyl-CoA dehydrogenase [Interproscan].

Gene families : OG_02_0000228 (OrthoFinder) Phylogenetic Tree(s): OG0000228_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: CRP00666
Cluster	HCCA: Cluster_11

Target	Alias	Description	ECC score	Gene Family Method	Actions
AAC75401	fadJ, b2341	enoyl-CoA hydratase/epimerase and...	0.03	OrthoFinder
CCL17232	hbd, BN171_1400004	3-hydroxybutyryl-CoA dehydrogenase [Ensembl]....	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003857	3-hydroxyacyl-CoA dehydrogenase activity	IEA	Interproscan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006631	fatty acid metabolic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016491	oxidoreductase activity	IEA	Interproscan
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	None	Extended
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0055114	obsolete oxidation-reduction process	IEA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004089	carbonate dehydratase activity	IEP	Enrichment
MF	GO:0004197	cysteine-type endopeptidase activity	IEP	Enrichment
MF	GO:0005215	transporter activity	IEP	Enrichment
BP	GO:0006810	transport	IEP	Enrichment
MF	GO:0008234	cysteine-type peptidase activity	IEP	Enrichment
BP	GO:0009292	genetic transfer	IEP	Enrichment
BP	GO:0009294	DNA mediated transformation	IEP	Enrichment
MF	GO:0015204	urea transmembrane transporter activity	IEP	Enrichment
BP	GO:0015833	peptide transport	IEP	Enrichment
BP	GO:0015840	urea transport	IEP	Enrichment
BP	GO:0016485	protein processing	IEP	Enrichment
MF	GO:0016829	lyase activity	IEP	Enrichment
MF	GO:0016846	carbon-sulfur lyase activity	IEP	Enrichment
BP	GO:0019755	one-carbon compound transport	IEP	Enrichment
MF	GO:0022857	transmembrane transporter activity	IEP	Enrichment
BP	GO:0042886	amide transport	IEP	Enrichment
MF	GO:0042887	amide transmembrane transporter activity	IEP	Enrichment
BP	GO:0044764	multi-organism cellular process	IEP	Enrichment
BP	GO:0051179	localization	IEP	Enrichment
BP	GO:0051234	establishment of localization	IEP	Enrichment
BP	GO:0051604	protein maturation	IEP	Enrichment
BP	GO:0051704	multi-organism process	IEP	Enrichment
BP	GO:0055085	transmembrane transport	IEP	Enrichment
BP	GO:0071586	CAAX-box protein processing	IEP	Enrichment
BP	GO:0071702	organic substance transport	IEP	Enrichment
BP	GO:0071705	nitrogen compound transport	IEP	Enrichment
BP	GO:0071918	urea transmembrane transport	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR006176	3-OHacyl-CoA_DH_NAD-bd	11	184
IPR006108	3HC_DH_C	188	256

External Links

Locus_tag	PAERUG_E11_London_26_VIM_2_06_13_04103