CRP08060 (virA)

Aliases : virA

Description : Wide host range VirA protein [Ensembl]. PAS fold, HAMP domain, Histidine kinase-, His Kinase A (phospho-acceptor) domain [Interproscan].

Gene families : OG_02_0000000 (OrthoFinder) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: CRP08060
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
AAC75429 evgS, b2370 hybrid sensory histidine kinase in two-component... 0.04 OrthoFinder
AAL20391 STM1471, rstB sensory histidine kinase in two-component regulatory... 0.03 OrthoFinder
AGT24483 N559_2810 ATPase/histidine kinase/DNA gyrase B/HSP90 domain... 0.03 OrthoFinder
CRO25485 bphP Bacteriophytochrome [Ensembl]. PAS fold, GAF domain,... 0.04 OrthoFinder
CRP58291 czcS_3 Sensor protein CzcS precursor [Ensembl]. HAMP domain,... 0.02 OrthoFinder
KNA54671 VCV51_030757 hsp90-like protein [Ensembl]. PAS fold, Histidine... 0.03 OrthoFinder
KNA54672 VCV51_030758 hsp90-like protein [Ensembl]. Histidine kinase-, His... 0.03 OrthoFinder
KNA55257 VCV51_033070 hsp90-like protein [Ensembl]. HAMP domain, Histidine... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEA Interproscan
BP GO:0007165 signal transduction IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0006810 transport IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR013656 PAS_4 294 397
IPR003661 HisK_dim/P 414 499
IPR003660 HAMP_dom 183 234
IPR003594 HATPase_C 554 666