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CRP16294


Description : anaerobic benzoate catabolism transcriptional regulator [Ensembl]. Cupin domain, Helix-turn-helix [Interproscan].


Gene families : OG_02_0000087 (OrthoFinder) Phylogenetic Tree(s): OG0000087_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CRP16294
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
CCL17559 BN171_1550012 conserved hypothetical protein [Ensembl]. Cupin domain,... 0.02 OrthoFinder
CCL17848 BN171_1840008 Transcriptional regulator, RmlC-type [Ensembl]. Cupin... 0.04 OrthoFinder
CCL17870 BN171_1900002 Transcriptional regulator, RmlC-type [Ensembl]. Cupin... 0.07 OrthoFinder
CCL19006 BN171_280021 Transcriptional regulator, RmlC-type [Ensembl]. Cupin... 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
MF GO:0008134 transcription factor binding IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR013096 Cupin_2 143 201
IPR001387 Cro/C1-type_HTH 36 86
Locus_tag PAERUG_E11_London_26_VIM_2_06_13_04590