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CRP27512 (trg_1)


Aliases : trg_1

Description : Ribose and galactose chemoreceptor protein [Ensembl]. HAMP domain, Methyl-accepting chemotaxis protein (MCP) signalling domain [Interproscan].


Gene families : OG_02_0000014 (OrthoFinder) Phylogenetic Tree(s): OG0000014_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CRP27512
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
AHY40671 CJ8421_07470 putative two-component sensor [Ensembl]. PAS domain... 0.04 OrthoFinder
CRP03424 mcpB_4 hypothetical protein [Ensembl]. HAMP domain,... 0.03 OrthoFinder
KNA55642 VCV51_030959 methyl-accepting chemotaxis protein [Ensembl]. HAMP... 0.04 OrthoFinder
KNA59985 VCV51_032397 methyl-accepting chemotaxis protein [Ensembl]. HAMP... 0.02 OrthoFinder
KNA60014 VCV51_032426 methyl-accepting chemotaxis protein [Ensembl]. PAS fold,... 0.05 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0007165 signal transduction IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
BP GO:0006355 regulation of transcription, DNA-templated IEP Enrichment
BP GO:0009889 regulation of biosynthetic process IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0031326 regulation of cellular biosynthetic process IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051252 regulation of RNA metabolic process IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Enrichment
BP GO:2001141 regulation of RNA biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR004089 MCPsignal_dom 436 618
IPR003660 HAMP_dom 322 371
Locus_tag PAERUG_E11_London_26_VIM_2_06_13_04918