CRP32671 (czcR_3)

Aliases : czcR_3

Description : Transcriptional activator protein CzcR [Ensembl]. Response regulator receiver domain, Transcriptional regulatory protein [Interproscan].

Gene families : OG_02_0000001 (OrthoFinder) Phylogenetic Tree(s): OG0000001_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: CRP32671
Cluster	HCCA: Cluster_37

Target	Alias	Description	ECC score	Gene Family Method
AAC73502	phoB, b0399	response regulator in two-component regulatory system...	0.03	OrthoFinder
AAC76061	qseB, b3025	quorum sensing DNA-binding response regulator in...	0.02	OrthoFinder
AAC77074	basR, b4113	response regulator in two-component regulatory system...	0.03	OrthoFinder
AAK99910	spr1107, rr02	Response regulator [Ensembl]. Transcriptional regulatory...	0.03	OrthoFinder
AAL20028	STM1096, copR	Copper resistance transcriptional regulatory protein...	0.03	OrthoFinder
AAL23116	STM4292, basR	response regulator in two-component regulatory system...	0.04	OrthoFinder
AGT24481	N559_2808, RstA	DNA-binding transcriptional regulator RstA [Ensembl]....	0.03	OrthoFinder
AGT25177	N559_3529, BasR	DNA-binding transcriptional regulator BasR [Ensembl]....	0.03	OrthoFinder
AKI49504	L2625_01607	DNA-binding response regulator [Ensembl]. Signal...	0.03	OrthoFinder
AKI50613	kdpE, L2625_02823	DNA-binding response regulator [Ensembl]. Signal...	0.02	OrthoFinder
CCG26924	No alias	Two-component system response regulator [Ensembl]....	0.03	OrthoFinder
CCL16989	BN171_1060003	Two-component response regulator [Ensembl]. Response...	0.03	OrthoFinder
CCL20055	BN171_3670038	Two-component response regulator, CheY family [Ensembl]....	0.03	OrthoFinder
CCL20251	BN171_390005	Two-component response regulator [Ensembl]. Response...	0.02	OrthoFinder
CPC70217	vicR, ERS093114_01104	Two-component response regulator [Ensembl]....	0.02	OrthoFinder
CRO52494	czcR_1	Transcriptional activator protein CzcR [Ensembl]....	0.02	OrthoFinder
CRP58313	czcR_4	Transcriptional activator protein CzcR [Ensembl]....	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003712	transcription coregulator activity	IEP	Enrichment
MF	GO:0003714	transcription corepressor activity	IEP	Enrichment
BP	GO:0006109	regulation of carbohydrate metabolic process	IEP	Enrichment
BP	GO:0006401	RNA catabolic process	IEP	Enrichment
BP	GO:0006402	mRNA catabolic process	IEP	Enrichment
MF	GO:0008556	P-type potassium transmembrane transporter activity	IEP	Enrichment
MF	GO:0008770	[acyl-carrier-protein] phosphodiesterase activity	IEP	Enrichment
BP	GO:0010629	negative regulation of gene expression	IEP	Enrichment
MF	GO:0015079	potassium ion transmembrane transporter activity	IEP	Enrichment
MF	GO:0015662	P-type ion transporter activity	IEP	Enrichment
BP	GO:0016071	mRNA metabolic process	IEP	Enrichment
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	Enrichment
MF	GO:0016989	sigma factor antagonist activity	IEP	Enrichment
MF	GO:0019829	ATPase-coupled cation transmembrane transporter activity	IEP	Enrichment
BP	GO:0034655	nucleobase-containing compound catabolic process	IEP	Enrichment
BP	GO:0044265	cellular macromolecule catabolic process	IEP	Enrichment
MF	GO:0140358	P-type transmembrane transporter activity	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR001789	Sig_transdc_resp-reg_receiver	3	112
IPR001867	OmpR/PhoB-type_DNA-bd	147	220

External Links

Locus_tag	PAERUG_E11_London_26_VIM_2_06_13_05088

CRP32671 (czcR_3)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation