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CRP41330


Description : Long-chain-fatty-acid--CoA ligase [Ensembl]. AMP-binding enzyme C-terminal domain [Interproscan].


Gene families : OG_02_0000029 (OrthoFinder) Phylogenetic Tree(s): OG0000029_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CRP41330
Cluster HCCA: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
AAC73148 caiC, b0037 putative crotonobetaine/carnitine-CoA ligase [Ensembl].... 0.03 OrthoFinder
AAC74875 fadD, b1805 acyl-CoA synthetase (long-chain-fatty-acid--CoA ligase)... 0.02 OrthoFinder
AGT23675 N559_1942 CoA ligase [Ensembl]. AMP-binding enzyme C-terminal... 0.04 OrthoFinder
CCP42824 fadD10, Rv0099 Possible fatty-acid-CoA ligase FadD10 (fatty-acid-CoA... 0.03 OrthoFinder
CRO01768 lcfB Long-chain-fatty-acid--CoA ligase [Ensembl]. AMP-binding... 0.1 OrthoFinder
CRO59249 No alias Long-chain-fatty-acid--CoA ligase [Ensembl]. AMP-binding... 0.05 OrthoFinder
CRP14921 No alias Long-chain-fatty-acid--CoA ligase [Ensembl]. AMP-binding... 0.07 OrthoFinder
CRP31520 fadD_1 Long-chain-fatty-acid--CoA ligase [Ensembl]. AMP-binding... 0.06 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008483 transaminase activity IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig 27 443
IPR025110 AMP-bd_C 452 528
Locus_tag PAERUG_E11_London_26_VIM_2_06_13_05317