CRP43486 (qseB_3)

Aliases : qseB_3

Description : Transcriptional regulatory protein QseB [Ensembl]. Response regulator receiver domain, Transcriptional regulatory protein [Interproscan].

Gene families : OG_02_0000001 (OrthoFinder) Phylogenetic Tree(s): OG0000001_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: CRP43486
Cluster	HCCA: Cluster_55

Target	Alias	Description	ECC score	Gene Family Method
AAC73502	phoB, b0399	response regulator in two-component regulatory system...	0.04	OrthoFinder
AAC74680	rstA, b1608	response regulator of RstAB two-component system...	0.05	OrthoFinder
AAC75035	hprR, b1969	response regulator family protein [Ensembl]....	0.05	OrthoFinder
AAC76061	qseB, b3025	quorum sensing DNA-binding response regulator in...	0.09	OrthoFinder
AAC77074	basR, b4113	response regulator in two-component regulatory system...	0.05	OrthoFinder
AAK98880	spr0076, rr08	Response regulator [Ensembl]. Transcriptional regulatory...	0.02	OrthoFinder
AAK99910	spr1107, rr02	Response regulator [Ensembl]. Transcriptional regulatory...	0.03	OrthoFinder
AAL20028	STM1096, copR	Copper resistance transcriptional regulatory protein...	0.05	OrthoFinder
AAL22051	STM3177, ygiX	putative transcriptional regulator [Ensembl]. Response...	0.05	OrthoFinder
AAL22364	STM3502, ompR	response regulator in two-component regulatory system...	0.04	OrthoFinder
AAL23116	STM4292, basR	response regulator in two-component regulatory system...	0.04	OrthoFinder
AGT22533	N559_0740, QseB	DNA-binding transcriptional regulator QseB [Ensembl]....	0.02	OrthoFinder
AGT25177	N559_3529, BasR	DNA-binding transcriptional regulator BasR [Ensembl]....	0.04	OrthoFinder
AGT25698	N559_4072, PhoB	transcriptional regulator PhoB [Ensembl]. Response...	0.02	OrthoFinder
AGT26862	N559_5288	Transcriptional regulatory protein pcoR [Ensembl]....	0.02	OrthoFinder
AHY40427	CJ8421_06100	two-component regulator [Ensembl]. Transcriptional...	0.02	OrthoFinder
AHY40431	CJ8421_06120	DNA-binding response regulator [Ensembl]....	0.02	OrthoFinder
AHY40464	CJ8421_06285	two-component regulator [Ensembl]. Transcriptional...	0.03	OrthoFinder
CCG26613	CiaR	Two component system response regulator CiaR [Ensembl]....	0.02	OrthoFinder
CCG26924	No alias	Two-component system response regulator [Ensembl]....	0.03	OrthoFinder
CCL16989	BN171_1060003	Two-component response regulator [Ensembl]. Response...	0.03	OrthoFinder
CCL19656	BN171_3350005	Two-component response regulator [Ensembl]. Response...	0.04	OrthoFinder
CCL20055	BN171_3670038	Two-component response regulator, CheY family [Ensembl]....	0.03	OrthoFinder
CCL20132	BN171_370006	Two-component response regulator [Ensembl]. Response...	0.02	OrthoFinder
CCL20251	BN171_390005	Two-component response regulator [Ensembl]. Response...	0.03	OrthoFinder
CCP43225	regX3, Rv0491	Two component sensory transduction protein RegX3...	0.02	OrthoFinder
CCP43777	kdpE, Rv1027c	Probable transcriptional regulatory protein KdpE...	0.02	OrthoFinder
CCP43784	trcR, Rv1033c	Two component transcriptional regulator TrcR [Ensembl]....	0.04	OrthoFinder
CPC31435	arlR, ERS093114_00002	Putative response regulator ArlR [Ensembl]....	0.06	OrthoFinder
CPC50543	saeR, ERS093114_00646	Response regulator SaeR [Ensembl]. Transcriptional...	0.02	OrthoFinder
CPC70217	vicR, ERS093114_01104	Two-component response regulator [Ensembl]....	0.08	OrthoFinder
CPC86428	phoP, ERS093114_01516	Alkaline phosphatase synthesis transcriptional...	0.02	OrthoFinder
CRO19997	qseB_2	Transcriptional regulatory protein QseB [Ensembl]....	0.03	OrthoFinder
CRO24960	ompR_1	Transcriptional regulatory protein OmpR [Ensembl]....	0.06	OrthoFinder
CRO38230	rstA	Transcriptional regulatory protein RstA [Ensembl]....	0.04	OrthoFinder
CRO52494	czcR_1	Transcriptional activator protein CzcR [Ensembl]....	0.1	OrthoFinder
CRO55563	arcA_1	Dye resistance protein [Ensembl]. Response regulator...	0.04	OrthoFinder
CRP45027	ompR_4	Transcriptional regulatory protein OmpR [Ensembl]....	0.04	OrthoFinder
CRP58313	czcR_4	Transcriptional activator protein CzcR [Ensembl]....	0.07	OrthoFinder
EDJ90310	CGSHi22421_02241	transcriptional regulatory protein [Ensembl]....	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	Enrichment
BP	GO:0006457	protein folding	IEP	Enrichment
MF	GO:0015035	protein-disulfide reductase activity	IEP	Enrichment
MF	GO:0015036	disulfide oxidoreductase activity	IEP	Enrichment
MF	GO:0016209	antioxidant activity	IEP	Enrichment
MF	GO:0016491	oxidoreductase activity	IEP	Enrichment
MF	GO:0016624	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor	IEP	Enrichment
MF	GO:0016667	oxidoreductase activity, acting on a sulfur group of donors	IEP	Enrichment
MF	GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	IEP	Enrichment
BP	GO:0017004	cytochrome complex assembly	IEP	Enrichment
BP	GO:0022607	cellular component assembly	IEP	Enrichment
BP	GO:0034622	cellular protein-containing complex assembly	IEP	Enrichment
BP	GO:0043933	protein-containing complex subunit organization	IEP	Enrichment
BP	GO:0065003	protein-containing complex assembly	IEP	Enrichment
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR001789	Sig_transdc_resp-reg_receiver	3	112
IPR001867	OmpR/PhoB-type_DNA-bd	145	216

External Links

Locus_tag	PAERUG_E11_London_26_VIM_2_06_13_05380

CRP43486 (qseB_3)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation