CRP56194 (intS_4)

Aliases : intS_4

Description : Putative prophage CPS-53 integrase [Ensembl]. Arm DNA-binding domain, Phage integrase family [Interproscan].

Gene families : OG_02_0005546 (OrthoFinder) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: CRP56194
Cluster	HCCA: Cluster_57

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006310	DNA recombination	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015074	DNA integration	IEA	Interproscan
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0000150	DNA strand exchange activity	IEP	Enrichment
BP	GO:0000746	conjugation	IEP	Enrichment
MF	GO:0004190	aspartic-type endopeptidase activity	IEP	Enrichment
MF	GO:0005507	copper ion binding	IEP	Enrichment
BP	GO:0006878	cellular copper ion homeostasis	IEP	Enrichment
CC	GO:0009279	cell outer membrane	IEP	Enrichment
BP	GO:0009291	unidirectional conjugation	IEP	Enrichment
BP	GO:0009292	genetic transfer	IEP	Enrichment
BP	GO:0030255	protein secretion by the type IV secretion system	IEP	Enrichment
MF	GO:0043169	cation binding	IEP	Enrichment
BP	GO:0044097	secretion by the type IV secretion system	IEP	Enrichment
BP	GO:0044764	multi-organism cellular process	IEP	Enrichment
MF	GO:0046872	metal ion binding	IEP	Enrichment
BP	GO:0051704	multi-organism process	IEP	Enrichment
BP	GO:0055070	copper ion homeostasis	IEP	Enrichment
MF	GO:0070001	aspartic-type peptidase activity	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR025166	Integrase_DNA_bind_dom	6	93
IPR002104	Integrase_catalytic	208	371
IPR004107	Integrase_SAM-like_N	99	150

External Links

Locus_tag	PAERUG_E11_London_26_VIM_2_06_13_05762