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CRP69095 (trpB)


Aliases : trpB

Description : Tryptophan synthase beta chain [Ensembl]. Pyridoxal-phosphate dependent enzyme [Interproscan].


Gene families : OG_02_0000713 (OrthoFinder) Phylogenetic Tree(s): OG0000713_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CRP69095
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
AAC74343 trpB, b1261 tryptophan synthase, beta subunit [Ensembl].... 0.02 OrthoFinder
AAL00435 spr1632, trpB Tryptophan synthase beta chain [Ensembl].... 0.01 OrthoFinder
AAL20644 STM1726, trpB tryptophan synthase, beta protein [Ensembl].... 0.03 OrthoFinder
AGT24682 N559_3019 tryptophan synthase subunit beta [Ensembl]. 0.11 OrthoFinder
AHY39604 CJ8421_01745 tryptophan synthase subunit beta [Ensembl].... 0.06 OrthoFinder
AKI49625 trpB, L2625_01735 tryptophan synthase, beta subunit [Ensembl].... 0.02 OrthoFinder
CCP44376 trpB, Rv1612 Tryptophan synthase, beta subunit TrpB [Ensembl].... 0.01 OrthoFinder
CPC32444 trpB, ERS093114_00044 Tryptophan synthase beta chain [Ensembl].... 0.11 OrthoFinder
EDJ91074 CGSHi22421_10047 tryptophan synthase subunit beta [Ensembl].... 0.03 OrthoFinder
KNA53895 VCV51_030824 tryptophan synthase [Ensembl]. Pyridoxal-phosphate... 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004834 tryptophan synthase activity IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006568 tryptophan metabolic process IEP Enrichment
BP GO:0006576 cellular biogenic amine metabolic process IEP Enrichment
BP GO:0006586 indolalkylamine metabolic process IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
BP GO:0006820 anion transport IEP Enrichment
MF GO:0008509 anion transmembrane transporter activity IEP Enrichment
MF GO:0008514 organic anion transmembrane transporter activity IEP Enrichment
BP GO:0009072 aromatic amino acid family metabolic process IEP Enrichment
BP GO:0009308 amine metabolic process IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015128 gluconate transmembrane transporter activity IEP Enrichment
BP GO:0015711 organic anion transport IEP Enrichment
BP GO:0015718 monocarboxylic acid transport IEP Enrichment
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016835 carbon-oxygen lyase activity IEP Enrichment
MF GO:0016836 hydro-lyase activity IEP Enrichment
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Enrichment
BP GO:0034220 ion transmembrane transport IEP Enrichment
BP GO:0035429 gluconate transmembrane transport IEP Enrichment
BP GO:0042430 indole-containing compound metabolic process IEP Enrichment
BP GO:0042873 aldonate transmembrane transport IEP Enrichment
MF GO:0042879 aldonate transmembrane transporter activity IEP Enrichment
BP GO:0044106 cellular amine metabolic process IEP Enrichment
BP GO:0046942 carboxylic acid transport IEP Enrichment
BP GO:0098656 anion transmembrane transport IEP Enrichment
BP GO:1901605 alpha-amino acid metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR001926 PLP-dep 58 383
Locus_tag PAERUG_E11_London_26_VIM_2_06_13_06151