CRP71014 (clpC_3)


Aliases : clpC_3

Description : ATP-dependent Clp protease ATP-binding subunit ClpC [Ensembl]. C-terminal, AAA lid domain, Clp amino terminal domain, AAA domain (Cdc48 subfamily), ATPase family associated with various cellular activities (AAA) [Interproscan].


Gene families : OG_02_0000042 (OrthoFinder) Phylogenetic Tree(s): OG0000042_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CRP71014
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AAC75641 clpB, b2592 protein disaggregation chaperone [Ensembl]. C-terminal,... 0.04 OrthoFinder
AKI48945 clpE, L2625_01027 ATP-dependent Clp protease, ATP-binding subunit... 0.04 OrthoFinder
CBI66855 clpB, HPB8_1298 ATP-dependent Clp protease ATP-binding subunit ClpB... 0.02 OrthoFinder
CCG26873 ClpE ATP-dependent Clp protease, ATP-binding subunit ClpE... 0.03 OrthoFinder
CCG27087 No alias putative ATP-dependent Clp proteinase (ATP-binding... 0.03 OrthoFinder
CCP43114 clpB, Rv0384c Probable endopeptidase ATP binding protein (chain B)... 0.03 OrthoFinder
CPC57876 clpC, ERS093114_00855 endopeptidase Clp ATP-binding subunit C [Ensembl].... 0.03 OrthoFinder
CRN66395 clpB_1 Heat shock protein F84.1 [Ensembl]. C-terminal, AAA lid... 0.05 OrthoFinder
CRO87324 clpC_2 Negative regulator of genetic competence ClpC/MecB... 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0006213 pyrimidine nucleoside metabolic process IEP Enrichment
BP GO:0006553 lysine metabolic process IEP Enrichment
MF GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase IEP Enrichment
BP GO:0009085 lysine biosynthetic process IEP Enrichment
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP Enrichment
BP GO:0009116 nucleoside metabolic process IEP Enrichment
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016763 pentosyltransferase activity IEP Enrichment
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Enrichment
MF GO:0016832 aldehyde-lyase activity IEP Enrichment
BP GO:0030001 metal ion transport IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
BP GO:0046451 diaminopimelate metabolic process IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Enrichment
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Enrichment
BP GO:1901135 carbohydrate derivative metabolic process IEP Enrichment
BP GO:1901657 glycosyl compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 307 440
IPR003959 ATPase_AAA_core 641 810
IPR019489 Clp_ATPase_C 816 894
IPR041546 ClpA/ClpB_AAA_lid 449 547
IPR004176 Clp_R_dom 199 248
IPR004176 Clp_R_dom 123 171