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  5. KNA51801

KNA51801 (VCV51_031516)


Aliases : VCV51_031516

Description : surface antigen [Ensembl]. Surface antigen variable number repeat [Interproscan].


Gene families : OG_02_0001024 (OrthoFinder) Phylogenetic Tree(s): OG0001024_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: KNA51801
Cluster HCCA: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
AAC73288 bamA, b0177 BamABCDE complex OM biogenesis outer membrane... 0.14 OrthoFinder
AAL19188 STM0224, yaeT putative outer membrane antigen [Ensembl]. Surface... 0.1 OrthoFinder
AKP15164 bamA, WX61_01110 Outer membrane protein assembly factor BamA precursor... 0.04 OrthoFinder
CBI66415 HPB8_858 putative outer membrane protein [Ensembl]. Surface... 0.03 OrthoFinder
CRO13664 bamA Outer membrane protein assembly factor BamA precursor... 0.05 OrthoFinder
EDJ91702 CGSHi22421_08103 protective surface antigen D15 [Ensembl]. Surface... 0.07 OrthoFinder
EDJ91703 CGSHi22421_08108 protective surface antigen D15 [Ensembl]. 0.03 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0019867 outer membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003887 DNA-directed DNA polymerase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005539 glycosaminoglycan binding IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006284 base-excision repair IEP Enrichment
BP GO:0006423 cysteinyl-tRNA aminoacylation IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
BP GO:0006720 isoprenoid metabolic process IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0008299 isoprenoid biosynthetic process IEP Enrichment
BP GO:0008610 lipid biosynthetic process IEP Enrichment
CC GO:0009317 acetyl-CoA carboxylase complex IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
BP GO:0030258 lipid modification IEP Enrichment
BP GO:0030259 lipid glycosylation IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
MF GO:0034061 DNA polymerase activity IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
MF GO:0042834 peptidoglycan binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043213 bacteriocin transport IEP Enrichment
BP GO:0044255 cellular lipid metabolic process IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
BP GO:0070085 glycosylation IEP Enrichment
BP GO:0070206 protein trimerization IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
InterPro domains Description Start Stop
IPR010827 BamA/TamA_POTRA 266 344
IPR010827 BamA/TamA_POTRA 176 263
IPR010827 BamA/TamA_POTRA 92 172
IPR010827 BamA/TamA_POTRA 347 420
IPR000184 Bac_surfAg_D15 448 803
No external refs found!