1. Home
  2. Species
  3. Vibrio cholerae
  4. Sequence
  5. KNA51829

KNA51829 (VCV51_033517)


Aliases : VCV51_033517

Description : ribosomal protein L13 [Ensembl]. Ribosomal protein L13 [Interproscan].


Gene families : OG_02_0000475 (OrthoFinder) Phylogenetic Tree(s): OG0000475_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: KNA51829
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AAC76263 rplM, b3231 50S ribosomal subunit protein L13 [Ensembl]. Ribosomal... 0.26 OrthoFinder
AAK99075 spr0271, rplM 50S Ribosomal protein L13 [Ensembl]. Ribosomal protein... 0.15 OrthoFinder
AAL22214 STM3345, rplM 50S ribosomal subunit protein L13 [Ensembl]. Ribosomal... 0.25 OrthoFinder
AGT22335 N559_0533 ribosomal protein L13 [Ensembl]. 0.12 OrthoFinder
AHY40659 rplM, CJ8421_07410 50S ribosomal protein L13 [Ensembl]. Ribosomal protein... 0.12 OrthoFinder
AKI50532 rplM, L2625_02742 ribosomal protein L13 [Ensembl]. Ribosomal protein L13... 0.05 OrthoFinder
AKP14942 rplM, WX61_00876 50S ribosomal protein L13 [Ensembl]. Ribosomal protein... 0.02 OrthoFinder
CBI67038 rplM, HPB8_1481 large subunit ribosomal protein L13 [Ensembl]. Ribosomal... 0.07 OrthoFinder
CCG27317 L13Ae LSU ribosomal protein L13p (L13Ae) [Ensembl]. Ribosomal... 0.1 OrthoFinder
CCL20597 rplM, BN171_70037 50S ribosomal protein L13 [Ensembl]. Ribosomal protein... 0.08 OrthoFinder
CPD14646 rplM, ERS093114_02155 50S ribosomal protein L13 [Ensembl]. Ribosomal protein... 0.21 OrthoFinder
CRP09073 rplM 50S ribosomal protein L13 [Ensembl]. Ribosomal protein... 0.21 OrthoFinder
EDJ91093 rplM, CGSHi22421_10142 50S ribosomal protein L13 [Ensembl]. Ribosomal protein... 0.09 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006412 translation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003697 single-stranded DNA binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006066 alcohol metabolic process IEP Enrichment
CC GO:0009349 riboflavin synthase complex IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0019751 polyol metabolic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0031554 regulation of DNA-templated transcription, termination IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043244 regulation of protein-containing complex disassembly IEP Enrichment
BP GO:0043647 inositol phosphate metabolic process IEP Enrichment
BP GO:0046164 alcohol catabolic process IEP Enrichment
BP GO:0046174 polyol catabolic process IEP Enrichment
BP GO:0046434 organophosphate catabolic process IEP Enrichment
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP Enrichment
BP GO:0046855 inositol phosphate dephosphorylation IEP Enrichment
BP GO:0051128 regulation of cellular component organization IEP Enrichment
BP GO:0071545 inositol phosphate catabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901615 organic hydroxy compound metabolic process IEP Enrichment
BP GO:1901616 organic hydroxy compound catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR005822 Ribosomal_L13 15 138
No external refs found!